Gene
RNA
| Item | Value |
|---|---|
| gene id | G1989465 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 2173021 ~ 2216455 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2275632 | True | 367 | lncRNA | 0.52 | 2 | 2173021 | 2216455 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110518853 | LOC106593614 | coding | upstream | 53473 | 2106537 ~ 2119548 (+) |
| LOC110514234 | LOC106592435 | coding | upstream | 95338 | 2023813 ~ 2095560 (+) |
| LOC110516127 | LOC106562400 | coding | upstream | 236642 | 1931880 ~ 1936379 (+) |
| LOC110518951 | LOC106588123 | coding | upstream | 363901 | 1802957 ~ 1809120 (+) |
| LOC110512298 | LOC106562814 | coding | upstream | 376736 | 1784882 ~ 1796285 (+) |
| LOC118944438 | zdhhc1 | coding | downstream | 83744 | 2300199 ~ 2390150 (+) |
| LOC118936601 | LOC106588035 | coding | downstream | 195006 | 2411461 ~ 2445866 (+) |
| LOC118944541 | NA | coding | downstream | 408295 | 2624750 ~ 2625422 (+) |
| LOC110516197 | LOC106588136 | coding | downstream | 905883 | 3121914 ~ 3321478 (+) |
| LOC110507004 | LOC106588039 | coding | downstream | 1275440 | 3491895 ~ 3496478 (+) |
| G1989460 | NA | non-coding | upstream | 9488 | 2151611 ~ 2163533 (+) |
| G1989458 | NA | non-coding | upstream | 16997 | 2148466 ~ 2156024 (+) |
| G1989446 | NA | non-coding | upstream | 68057 | 2104338 ~ 2104964 (+) |
| G1989441 | NA | non-coding | upstream | 81314 | 2082539 ~ 2091707 (+) |
| G1989439 | NA | non-coding | upstream | 91318 | 2079859 ~ 2081703 (+) |
| G1989472 | NA | non-coding | downstream | 15734 | 2232189 ~ 2233024 (+) |
| G1989885 | NA | non-coding | downstream | 36807 | 2253262 ~ 2253513 (+) |
| G1989897 | NA | non-coding | downstream | 148173 | 2364628 ~ 2366580 (+) |
| G1989898 | NA | non-coding | downstream | 150199 | 2366654 ~ 2367307 (+) |
| G1989900 | NA | non-coding | downstream | 156744 | 2373199 ~ 2374948 (+) |
| G1989393 | NA | other | upstream | 197097 | 1975037 ~ 1975924 (+) |
| G1989338 | NA | other | upstream | 329276 | 1840690 ~ 1843745 (+) |
| G1989250 | NA | other | upstream | 523432 | 1625429 ~ 1649589 (+) |
| G1989958 | NA | other | downstream | 255041 | 2471496 ~ 2483743 (+) |
| G1989960 | NA | other | downstream | 262056 | 2478511 ~ 2480269 (+) |
| G1989959 | NA | other | downstream | 265731 | 2482186 ~ 2483541 (+) |
