Gene
RNA
| Item | Value |
|---|---|
| gene id | G1989883 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 2247817 ~ 2249270 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2276140 | False | 297 | lncRNA | 0.43 | 2 | 2247817 | 2249270 |
| TU2276143 | True | 248 | lncRNA | 0.43 | 2 | 2247817 | 2249270 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118944440 | NA | coding | downstream | 156068 | 2086953 ~ 2091749 (-) |
| LOC110510393 | LOC106592435 | coding | downstream | 244183 | 1975952 ~ 2003634 (-) |
| LOC110511392 | LOC106594384 | coding | downstream | 275552 | 1967815 ~ 1972265 (-) |
| LOC110520677 | LOC105028853 | coding | downstream | 364861 | 1849296 ~ 1882956 (-) |
| LOC118944522 | NA | coding | downstream | 403839 | 1841033 ~ 1843978 (-) |
| LOC118944544 | NA | coding | upstream | 231504 | 2480774 ~ 2480976 (-) |
| LOC118944543 | NA | coding | upstream | 232987 | 2478242 ~ 2486594 (-) |
| LOC118944516 | NA | coding | upstream | 234607 | 2483877 ~ 2484392 (-) |
| LOC110519438 | plekhg4 | coding | upstream | 340193 | 2589463 ~ 2786486 (-) |
| LOC118944482 | LOC106588022 | coding | upstream | 606823 | 2856093 ~ 2905683 (-) |
| G1989869 | NA | non-coding | downstream | 26860 | 2219490 ~ 2220957 (-) |
| G1989860 | NA | non-coding | downstream | 27277 | 2186555 ~ 2220540 (-) |
| G1989855 | NA | non-coding | downstream | 71027 | 2162440 ~ 2176790 (-) |
| G1989856 | NA | non-coding | downstream | 74956 | 2172514 ~ 2172861 (-) |
| G1989846 | NA | non-coding | downstream | 102286 | 2145240 ~ 2145531 (-) |
| G1989886 | NA | non-coding | upstream | 50529 | 2299799 ~ 2300019 (-) |
| G1989923 | NA | non-coding | upstream | 61570 | 2310840 ~ 2311146 (-) |
| G1989924 | NA | non-coding | upstream | 67122 | 2316392 ~ 2316808 (-) |
| G1989925 | NA | non-coding | upstream | 68820 | 2318090 ~ 2318472 (-) |
| G1989929 | NA | non-coding | upstream | 120350 | 2369620 ~ 2445731 (-) |
| terfa | LOC106588121 | other | downstream | 411502 | 1811256 ~ 1840909 (-) |
| G1989684 | NA | other | downstream | 643468 | 1599317 ~ 1604349 (-) |
| G1989681 | NA | other | downstream | 652801 | 1593497 ~ 1595016 (-) |
| LOC110516588 | LOC106588078 | other | downstream | 1615827 | 620743 ~ 756868 (-) |
| LOC110514501 | lrrc28 | other | downstream | 1645116 | 566552 ~ 610773 (-) |
| G1989922 | NA | other | upstream | 55568 | 2304838 ~ 2305780 (-) |
| G1989939 | NA | other | upstream | 149003 | 2398273 ~ 2399734 (-) |
| G1990296 | NA | other | upstream | 706140 | 2955410 ~ 2956519 (-) |
