G1989931


Basic Information

Item Value
gene id G1989931
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 2370444 ~ 2376512 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2276224
ctattccctatatagtggtactactatataccagagccctattccctatatagtggtactactatagaccagagccctattccctatatagtggtactactatagaccagagccctattccctatatagtggtactactacagaccagagccctattccctatatagtggtactactatagaccagagccctattccctatatagtgcactacattagaccagagccctattccctatatagggcactactttcaaccagagccctattccctatatagtgcactactttcaaccagagccttattccctatatagggcactactttcaaccagagccctattccctatatagtgcactactttcaaccagagccttattccctatatagggcactactttcaaccagagccCATGTGGACTGGGCCGGGGCCAGAGCTGTGGTTTGATGggactactgtgtgtgtgtgtgttgcaggacgGGGTTCTTTGTGAGTGTGCCAGGTGCAGCTGGTGGGTAGATGTCCATCCCGTCAGCTGCTGGGTTTTGGTCACAGCCAGACAACCCAGGCCAAGCCTAACAGAGCGTCACCATGGTTACCCAAACCCAGCATGCAGCCCAGACTGGGAGAGCAGCCAACGATCACAGggcagggaggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtaaggaCTTGTAAGTCTGCATTTGACGGCGTGATTGTGGacgggtgtgtctgtgtgaagtCAGAGTCAGTAATTATATCAGGACAGGTGTGAaaccagggtcagtaactatcaggacagGTATGAAGCCAGTCAGCCGGGAGGCCGAGGGAGGCCAGTATGTACTGCTGtcctagtggtgtagtcagccgagggaggtcagtatgtaccactatcctagtggtgtagtcagccgagGGAGGCCAGTATGTACCACTAtcctagtggtgtagtcagccgagggaggtcagtatgtaccactgtcctagtggtgtagtcagccgagGGGGATCAGTATGTTCTACTGtcctagtggtgtagtcagccgagGGAGGCCAGTGTGTACCACTAtcctagtggtgtagtcagccgagggaggtcAGCATGTACTACCttcctagtggtgtagtcagccgGGAGGCCGAGGGAGGTCAGTATGTACCACTATCCTAGTAGTGtagtcagccgagggaggtcAGTATGTACTACTAtcctagtggtgtagtcagccgagGGAGGCCAGTATGTACCACTAtcctagtggtgtagtcagccgGGAGGCCGAGGGAGGTCAGTATGTACTACTAtcctagtggtgtagtcagccgagGGAGGCCAGTATGTACCACTAtcctagtggtgtagtcagccgagggaggtcagtatgtaccactgtcctagtggtgtagtcagccgagggaggtcagtatgtaccactgtcctagtggtgtagtcagccgagggagGTCAGTATGTACCACTATCCTAGTAGTGTAGTCAGACGAGGGAGGTCAGTATGTACCACTATCCTAGTAGTGtagtcagccgagggaggtcAGTATGTACCACTGTCCTAGTGGTGTAGTCAGACGAGGGAGGTCAGTATGTACCACTATCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2276224 True 1648 lncRNA 0.51 7 2370444 2376512

Neighbor

gene id symbol gene type direction distance location
LOC110518214 LOC106591800 coding downstream 117689 2092264 ~ 2252755 (-)
LOC118944440 NA coding downstream 278695 2086953 ~ 2091749 (-)
LOC110510393 LOC106592435 coding downstream 366810 1975952 ~ 2003634 (-)
LOC110511392 LOC106594384 coding downstream 398179 1967815 ~ 1972265 (-)
LOC110520677 LOC105028853 coding downstream 487488 1849296 ~ 1882956 (-)
LOC118944544 NA coding upstream 104262 2480774 ~ 2480976 (-)
LOC118944543 NA coding upstream 105745 2478242 ~ 2486594 (-)
LOC118944516 NA coding upstream 107365 2483877 ~ 2484392 (-)
LOC110519438 plekhg4 coding upstream 212951 2589463 ~ 2786486 (-)
LOC118944482 LOC106588022 coding upstream 479581 2856093 ~ 2905683 (-)
G1989925 NA non-coding downstream 51972 2318090 ~ 2318472 (-)
G1989924 NA non-coding downstream 53636 2316392 ~ 2316808 (-)
G1989923 NA non-coding downstream 59298 2310840 ~ 2311146 (-)
G1989886 NA non-coding downstream 70425 2299799 ~ 2300019 (-)
G1989883 NA non-coding downstream 121174 2247817 ~ 2249270 (-)
G1989934 NA non-coding upstream 8288 2384800 ~ 2385197 (-)
G1989937 zdhhc1 non-coding upstream 12742 2389254 ~ 2393500 (-)
G1989944 NA non-coding upstream 42432 2418944 ~ 2426813 (-)
G1989948 NA non-coding upstream 64985 2441497 ~ 2442750 (-)
G1989955 NA non-coding upstream 83804 2460316 ~ 2460626 (-)
G1989922 NA other downstream 64664 2304838 ~ 2305780 (-)
terfa LOC106588121 other downstream 534129 1811256 ~ 1840909 (-)
G1989684 NA other downstream 766095 1599317 ~ 1604349 (-)
G1989681 NA other downstream 775428 1593497 ~ 1595016 (-)
G1989939 NA other upstream 21761 2398273 ~ 2399734 (-)
G1990296 NA other upstream 578898 2955410 ~ 2956519 (-)
LOC118944401 LOC106588129 other upstream 583000 2958963 ~ 3117243 (-)

Expression


Co-expression Network