G1990297


Basic Information

Item Value
gene id G1990297
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 2851656 ~ 2853030 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2276713
ttatataatataatatatatatactttttttagccccctttttctccctaattatgatcttgtctcatcgctgcaacttcccaacgttctcgggagaggcgaaggcgGAGTCACGCGTCCTCCGGAACACGACCCGCCAAACCTCGCTCTTTAAGGGCTCCCGAGCGGCGCAGtggtactacagaccctggttcgattccaggctgtatcgcagcggtctaaggtactacagaccctggttccagagagagagagagagatccctgATTGGTTTGTGCTCTGTTAccccaactcctatggtcatggTCAGGCCAAACAGCAATAACAACAACCataggagttgacaagacagcacaaGCTGATATGAGACCAGGCCATGAGATTATCAGGAAAGTCTCTAATTTCCCAGCCCCGAGCCAGCATCGATGCTTGATGACCATAGCCCCGAGCCAGCATCGATGCTTGATGACCATAGCCCCGAGCCAGCATCGATGCTTGATGACCATAGCCCAGAGCCAGCATTGATGCTTGATGACCATAGCCCCGAGCCAGCATCGATGCTTGATGACCAGAGCCCAGAACCAGCAtcacctggtcccagatctgtttgtgatgtCTGCAGACctactcctctcatcccctcaGTAGTGATGAACCTGGACCTCAGGAAGCCCAGGGGGAGACACAGTATTTAatactcctctcatcctctcagtAGTGATGAACCTGGACCTCAGGAAGCCCAGGGGGAGACACAGTATTTAATATGATGTATATTTAACCCACTAGTCCATGCGACAGGTAGAGTAGTTCCTGATGATATTCATCTGGGAGaactttctctgtttctctcatcaTGTACAGTCAGAGCAGGTCAATCACAGCCTGCCTCCTAATTGGCACCCTTaacccctacatagtgcactactatagggtctatggggctctggtcaaaagtagtgcactatattggcaATAGGGAATGTGATTTGGGAAATAACCCCTAAGAATCGCCCCCTTAGTGACTTTAAACAGCACTTCACCTTCcaatccctctctctgcctgtccttTATGGCCTGTGTCAACCCAATGCAGCCGTATGTTAAGACT

Function

NR:

description
PREDICTED: titin-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2276713 True 1111 lncRNA 0.49 2 2851656 2853030

Neighbor

gene id symbol gene type direction distance location
LOC110519438 plekhg4 coding downstream 65174 2589463 ~ 2786486 (-)
LOC118944516 NA coding downstream 367264 2483877 ~ 2484392 (-)
LOC118944543 NA coding downstream 368654 2478242 ~ 2486594 (-)
LOC118944544 NA coding downstream 370680 2480774 ~ 2480976 (-)
LOC110518214 LOC106591800 coding downstream 598901 2092264 ~ 2252755 (-)
LOC118944482 LOC106588022 coding upstream 3063 2856093 ~ 2905683 (-)
LOC118944483 NA coding upstream 18304 2871334 ~ 2873840 (-)
LOC118944401 LOC106588129 coding upstream 105933 2958963 ~ 3117243 (-)
LOC118944414 NA coding upstream 331909 3183940 ~ 3186858 (-)
LOC110506223 LOC106588037 coding upstream 624128 3477158 ~ 3492750 (-)
G1990320 NA non-coding downstream 21050 2830024 ~ 2830606 (-)
G1990314 NA non-coding downstream 40535 2810106 ~ 2811121 (-)
G1990312 NA non-coding downstream 43852 2805115 ~ 2807804 (-)
G1990308 NA non-coding downstream 56708 2792564 ~ 2794948 (-)
G1990306 NA non-coding downstream 69204 2781006 ~ 2782452 (-)
G1990326 NA non-coding upstream 6353 2859383 ~ 2859859 (-)
G1990301 NA non-coding upstream 50454 2903484 ~ 2904334 (-)
G1990296 NA non-coding upstream 102380 2955410 ~ 2956519 (-)
G1990359 NA non-coding upstream 120713 2973743 ~ 2976907 (-)
G1990364 NA non-coding upstream 127951 2980981 ~ 2982122 (-)
G1989939 NA other downstream 451922 2398273 ~ 2399734 (-)
G1989922 NA other downstream 545876 2304838 ~ 2305780 (-)
G1990495 LOC106562810 other upstream 434137 3287167 ~ 3288498 (-)
G1990760 LOC100379111 other upstream 649921 3502951 ~ 3515660 (-)

Expression


Co-expression Network