Gene
RNA
| Item | Value |
|---|---|
| gene id | G1990388 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 3058230 ~ 3058994 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: histidine-rich glycoprotein-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2276851 | True | 697 | lncRNA | 0.40 | 2 | 3058230 | 3058994 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118944482 | LOC106588022 | coding | downstream | 152547 | 2856093 ~ 2905683 (-) |
| LOC118944483 | NA | coding | downstream | 184390 | 2871334 ~ 2873840 (-) |
| LOC110519438 | plekhg4 | coding | downstream | 271748 | 2589463 ~ 2786486 (-) |
| LOC118944516 | NA | coding | downstream | 573838 | 2483877 ~ 2484392 (-) |
| LOC118944543 | NA | coding | downstream | 575228 | 2478242 ~ 2486594 (-) |
| LOC118944414 | NA | coding | upstream | 125945 | 3183940 ~ 3186858 (-) |
| LOC110506223 | LOC106588037 | coding | upstream | 418164 | 3477158 ~ 3492750 (-) |
| LOC110516700 | LOC106591035 | coding | upstream | 1015051 | 4074045 ~ 4158044 (-) |
| LOC110498670 | anx2a | coding | upstream | 1311388 | 4370382 ~ 4390993 (-) |
| LOC118944435 | LOC106588010 | coding | upstream | 1380839 | 4439833 ~ 4700484 (-) |
| G1990382 | NA | non-coding | downstream | 19309 | 3034931 ~ 3038921 (-) |
| G1990381 | NA | non-coding | downstream | 26472 | 3028140 ~ 3031758 (-) |
| G1990364 | NA | non-coding | downstream | 76108 | 2980981 ~ 2982122 (-) |
| G1990359 | NA | non-coding | downstream | 81323 | 2973743 ~ 2976907 (-) |
| G1990296 | NA | non-coding | downstream | 101711 | 2955410 ~ 2956519 (-) |
| G1990394 | NA | non-coding | upstream | 23745 | 3082739 ~ 3083193 (-) |
| G1990400 | NA | non-coding | upstream | 60381 | 3119375 ~ 3119592 (-) |
| G1990443 | NA | non-coding | upstream | 65183 | 3124177 ~ 3129186 (-) |
| G1990467 | NA | non-coding | upstream | 151186 | 3210180 ~ 3211265 (-) |
| LOC118944401 | LOC106588129 | other | downstream | 62805 | 2958963 ~ 3117243 (-) |
| G1989939 | NA | other | downstream | 658496 | 2398273 ~ 2399734 (-) |
| G1990495 | LOC106562810 | other | upstream | 228173 | 3287167 ~ 3288498 (-) |
| G1990760 | LOC100379111 | other | upstream | 443957 | 3502951 ~ 3515660 (-) |
| G1990907 | NA | other | upstream | 751211 | 3810205 ~ 3810560 (-) |
| G1990926 | NA | other | upstream | 813606 | 3872600 ~ 3873176 (-) |
