G1990443


Basic Information

Item Value
gene id G1990443
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 3124177 ~ 3129186 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2276960
CATCCACTGTCACGGAGTAGAGGACCATTGACTACGAGATACAGTAGCAATGATGGCATTGATctcaaccatatcatgtctggtttgggtaagataatgtaacgcaaccatatcatgtctggtttgggtaagataatgtaacaaccatatcatgtctggtttgggtaagataatgtaacacaaccatatcatgtctggtttgggtaagataatgtaacacaaccatatcatgtctggtttgggtaagataatgtaacacaaccatatcatgtctgttttgggtaagataatgtaacacaaccatatcatgtctggtttgggtaagataatgtaacacaaccatatcatgtctggtctgggtaagataatgtaacaaccatatcatgtctggtttgggtaagataatgtaacaaccatatcatgtctggtttgggtaagataatgtaacacaaccatatcatgtctggtttgggtaagataatgtaacaaccatatcatgtctggtttgggtaagataatgtaacacaaccatatcatgtctggtttgggtaagataatgtaacacaaccatatcatgtctggtttgggtaagataatgtaacacaccgtatcatgtctggtttgggtaagataatgtaacacaaccgtatcatgtctggtttgggtaagataatgtaacacaaccatatcatgtctggtttgggtaagataatgtaacacaaccgtatcatgtctggtttggggaagataatgtaacaaccatatcatgtctggtttgggtaagataatgtaacacaaccatatcatgtctggtttgggtaagataatgtaacacaaccatatcatgtctggtttgggtaagataatgtaacacaaccgtatcatgtctggtttggggaagataatgtaacacaaccatatcatgtctggtttgggtaagataatgtaacaaccatatcatgtctggtttgggtaagataatgtaacaaccatatcatgtctggtttgggtaagataatgtaacacaaccatatcatgtctggtttgggtaagataatgtaacacaaccgtatcatgtctggtttgggtaagataatgtaacacaaccgtatcatgtctggtttgggtaagataatgtaacacaacgtatcatgtctggtttgggtaagataatgtaacacaa

Function

NR:

description
PREDICTED: serine palmitoyltransferase 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2276960 True 1183 lncRNA 0.37 2 3124177 3129186

Neighbor

gene id symbol gene type direction distance location
LOC118944401 LOC106588129 coding downstream 6934 2958963 ~ 3117243 (-)
LOC118944482 LOC106588022 coding downstream 218494 2856093 ~ 2905683 (-)
LOC118944483 NA coding downstream 250337 2871334 ~ 2873840 (-)
LOC110519438 plekhg4 coding downstream 337695 2589463 ~ 2786486 (-)
LOC118944516 NA coding downstream 639785 2483877 ~ 2484392 (-)
LOC118944414 NA coding upstream 55753 3183940 ~ 3186858 (-)
LOC110506223 LOC106588037 coding upstream 347972 3477158 ~ 3492750 (-)
LOC110516700 LOC106591035 coding upstream 944859 4074045 ~ 4158044 (-)
LOC110498670 anx2a coding upstream 1241196 4370382 ~ 4390993 (-)
LOC118944435 LOC106588010 coding upstream 1310647 4439833 ~ 4700484 (-)
G1990400 NA non-coding downstream 4585 3119375 ~ 3119592 (-)
G1990394 NA non-coding downstream 40984 3082739 ~ 3083193 (-)
G1990388 NA non-coding downstream 65183 3058230 ~ 3058994 (-)
G1990382 NA non-coding downstream 85256 3034931 ~ 3038921 (-)
G1990381 NA non-coding downstream 92419 3028140 ~ 3031758 (-)
G1990467 NA non-coding upstream 80994 3210180 ~ 3211265 (-)
G1990478 NA non-coding upstream 103994 3233180 ~ 3233587 (-)
G1990489 NA non-coding upstream 126315 3255501 ~ 3259682 (-)
G1990503 NA non-coding upstream 185816 3315002 ~ 3315544 (-)
G1990296 NA other downstream 167658 2955410 ~ 2956519 (-)
LOC118944543 NA other downstream 637583 2478242 ~ 2486594 (-)
G1989939 NA other downstream 724443 2398273 ~ 2399734 (-)
G1990495 LOC106562810 other upstream 157981 3287167 ~ 3288498 (-)
G1990760 LOC100379111 other upstream 373765 3502951 ~ 3515660 (-)
G1990907 NA other upstream 681019 3810205 ~ 3810560 (-)
G1990926 NA other upstream 743414 3872600 ~ 3873176 (-)

Expression


Co-expression Network