Gene
RNA
| Item | Value |
|---|---|
| gene id | G1990467 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 3210180 ~ 3211265 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: RNA-directed DNA polymerase from mobile element jockey-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2276990 | True | 202 | lncRNA | 0.48 | 2 | 3210180 | 3211265 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118944414 | NA | coding | downstream | 24388 | 3183940 ~ 3186858 (-) |
| LOC118944401 | LOC106588129 | coding | downstream | 92937 | 2958963 ~ 3117243 (-) |
| LOC118944482 | LOC106588022 | coding | downstream | 304497 | 2856093 ~ 2905683 (-) |
| LOC118944483 | NA | coding | downstream | 336340 | 2871334 ~ 2873840 (-) |
| LOC110519438 | plekhg4 | coding | downstream | 423698 | 2589463 ~ 2786486 (-) |
| LOC110506223 | LOC106588037 | coding | upstream | 265893 | 3477158 ~ 3492750 (-) |
| LOC110516700 | LOC106591035 | coding | upstream | 862780 | 4074045 ~ 4158044 (-) |
| LOC110498670 | anx2a | coding | upstream | 1159117 | 4370382 ~ 4390993 (-) |
| LOC118944435 | LOC106588010 | coding | upstream | 1228568 | 4439833 ~ 4700484 (-) |
| LOC110526851 | vps13c | coding | upstream | 1507387 | 4718652 ~ 4972108 (-) |
| G1990443 | NA | non-coding | downstream | 80994 | 3124177 ~ 3129186 (-) |
| G1990400 | NA | non-coding | downstream | 90588 | 3119375 ~ 3119592 (-) |
| G1990394 | NA | non-coding | downstream | 126987 | 3082739 ~ 3083193 (-) |
| G1990388 | NA | non-coding | downstream | 151186 | 3058230 ~ 3058994 (-) |
| G1990478 | NA | non-coding | upstream | 21915 | 3233180 ~ 3233587 (-) |
| G1990489 | NA | non-coding | upstream | 44236 | 3255501 ~ 3259682 (-) |
| G1990503 | NA | non-coding | upstream | 103737 | 3315002 ~ 3315544 (-) |
| G1990506 | NA | non-coding | upstream | 105829 | 3317094 ~ 3317711 (-) |
| G1990507 | NA | non-coding | upstream | 112175 | 3323440 ~ 3326275 (-) |
| G1990296 | NA | other | downstream | 253661 | 2955410 ~ 2956519 (-) |
| LOC118944543 | NA | other | downstream | 723586 | 2478242 ~ 2486594 (-) |
| G1989939 | NA | other | downstream | 810446 | 2398273 ~ 2399734 (-) |
| G1990495 | LOC106562810 | other | upstream | 75902 | 3287167 ~ 3288498 (-) |
| G1990760 | LOC100379111 | other | upstream | 291686 | 3502951 ~ 3515660 (-) |
| G1990907 | NA | other | upstream | 598940 | 3810205 ~ 3810560 (-) |
| G1990926 | NA | other | upstream | 661335 | 3872600 ~ 3873176 (-) |
