G1990505


Basic Information

Item Value
gene id G1990505
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 3328130 ~ 3330049 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2277034
cgtgtctaacgtTTAAACCGTGTCTAATGTTTAAACCGTGTCTAACGTTTAAACCGTGTCTAATGTTTAAACCGTGTCTAATGTTTAAACCGTGTCTAACGTTTAAACCGTGTCTAATGTTTAAACCGTGTCTAACGTTTAAACCGTGTCTAATGTTTAAACCGTGTCTAATGTTTAAACCGTGTCTAATGTTTAAACCGTGTCTAATGTTTAAACCGTGTCTAATGTTTAAACCGTGTCTAATGTTTAAACCGTGTCAATGTTGGGATGTCAACTTTCTAaagagtttttttgttgttgtttatttgtgAGGCCGTAGAGAAACGAGAGTTGCAACAGTCCCAATATCTAAATCAAATCCTGTGAAAATGGTCCTCCTGCCCTTCAGCCTCTTCAGCCTTCCTGGACAGTGACCCTCTTGTGTACGGGCTCATGCTAAAGACATAGAGGAGCCTGTTTACAGATCACTACATAGATGACATGTGGGAGTTCCCTGTAGCTGATCCCAGAATGTGATGCTGAACTCAGGAGAAGAGTTCCCAAGTGAGGCTGATCCCAGAATGTGATGCTGAACTCAGGAGAAGAGTTCCCACGTGTGGCTGATCCCAGAACGTGATGCTGAACTAGGTAGAAGAGTTCCCAAGTGAGGCTGATCCCAGAATGTGATGCTGAACTAGGTTGACGAGTTCCCAAGTGTGGCTGATCCCAGAACGTGATGCTGAACTAGGTAGAAGAGTTCCCAAGTGAGGCTGATCCCAGAATGTGATGCTGAACTAGGTAGAAGAGTTCCCAAGTGTGGCTGATCCCAGAATGTGATGCTGAACTAGGTAGAAGAGTTCCCAAGTGTGGCTGATCCCAGAATGTGATGCTGAACTAGGTAGAAGAGTTCCCAAGTGTGGCTGATCCCAGAATGTGATGCTGAACTCAATAGAGTTCCTGGTACAACTCTTCTCTCGTCTTCAACCACCATGCTGTGTGCTTTACACTTCAATACATCAACACATTACAGCTCGTTTCATCACTTGGCATCTGAACATGATGAAATCCTATTgcaacacactacagtagatttGAAGGGAGGCAGTGACCCCTGGTGGCCAATCGGTGAAACTTCAGGCAGTACAGTATAACAGGATACTATGGGAtagtcccaaatgtcaccctatagTGTACAACTTATAAGCAGAGGCCTatggggtgccattttgggacagtAACTAGAATCAGTCATGCTGTCTATATTACTTATCAGATGCTTATATCAAAGGGattttacacctgcattgcttgctgtttggggttttaggctgggtttctgtacagcactttgagatatcagctgatg

Function

NR:

description
PREDICTED: keratin-associated protein 5-3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2277034 True 1345 lncRNA 0.44 5 3328130 3330049

Neighbor

gene id symbol gene type direction distance location
LOC118944414 NA coding downstream 142338 3183940 ~ 3186858 (-)
LOC118944401 LOC106588129 coding downstream 210887 2958963 ~ 3117243 (-)
LOC118944482 LOC106588022 coding downstream 422447 2856093 ~ 2905683 (-)
LOC118944483 NA coding downstream 454290 2871334 ~ 2873840 (-)
LOC110519438 plekhg4 coding downstream 541648 2589463 ~ 2786486 (-)
LOC110506223 LOC106588037 coding upstream 147109 3477158 ~ 3492750 (-)
LOC110516700 LOC106591035 coding upstream 743996 4074045 ~ 4158044 (-)
LOC110498670 anx2a coding upstream 1040333 4370382 ~ 4390993 (-)
LOC118944435 LOC106588010 coding upstream 1109784 4439833 ~ 4700484 (-)
LOC110526851 vps13c coding upstream 1388603 4718652 ~ 4972108 (-)
G1990507 NA non-coding downstream 1855 3323440 ~ 3326275 (-)
G1990506 NA non-coding downstream 10419 3317094 ~ 3317711 (-)
G1990503 NA non-coding downstream 12586 3315002 ~ 3315544 (-)
G1990489 NA non-coding downstream 68448 3255501 ~ 3259682 (-)
G1990478 NA non-coding downstream 94543 3233180 ~ 3233587 (-)
G1990523 NA non-coding upstream 13818 3343867 ~ 3344264 (-)
G1990529 NA non-coding upstream 17381 3347430 ~ 3347833 (-)
G1990537 NA non-coding upstream 28351 3358400 ~ 3358687 (-)
G1990770 NA non-coding upstream 94399 3424448 ~ 3424860 (-)
G1990773 NA non-coding upstream 99765 3429814 ~ 3430290 (-)
G1990495 LOC106562810 other downstream 39632 3287167 ~ 3288498 (-)
G1990296 NA other downstream 371611 2955410 ~ 2956519 (-)
LOC118944543 NA other downstream 841536 2478242 ~ 2486594 (-)
G1990760 LOC100379111 other upstream 172902 3502951 ~ 3515660 (-)
G1990907 NA other upstream 480156 3810205 ~ 3810560 (-)
G1990926 NA other upstream 542551 3872600 ~ 3873176 (-)
G1990927 LOC106591093 other upstream 544866 3873304 ~ 3880013 (-)

Expression


Co-expression Network