Gene
RNA
| Item | Value |
|---|---|
| gene id | G1990588 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 3435391 ~ 3435604 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2277132 | True | 214 | lncRNA | 0.46 | 1 | 3435391 | 3435604 |
3,434,000
3,434,400
3,434,800
3,435,200
3,435,600
3,436,000
3,436,000
3,436,400
3,436,800
3,437,200
3,437,600
3,438,000
NC_048590.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110516197 | LOC106588136 | coding | upstream | 115040 | 3121914 ~ 3321478 (+) |
| LOC118944541 | NA | coding | upstream | 809969 | 2624750 ~ 2625422 (+) |
| LOC118936601 | LOC106588035 | coding | upstream | 989525 | 2411461 ~ 2445866 (+) |
| LOC118944438 | zdhhc1 | coding | upstream | 1045241 | 2300199 ~ 2390150 (+) |
| LOC110518853 | LOC106593614 | coding | upstream | 1315843 | 2106537 ~ 2119548 (+) |
| LOC110507004 | LOC106588039 | coding | downstream | 56291 | 3491895 ~ 3496478 (+) |
| LOC110507010 | LOC100379111 | coding | downstream | 67322 | 3502926 ~ 3506049 (+) |
| LOC110518574 | LOC106588131 | coding | downstream | 437726 | 3873330 ~ 3932334 (+) |
| LOC110518573 | LOC106592649 | coding | downstream | 498796 | 3934400 ~ 3965539 (+) |
| trnat-agu-149 | NA | coding | downstream | 537711 | 3973315 ~ 3973388 (+) |
| G1990586 | NA | non-coding | upstream | 3487 | 3431680 ~ 3431904 (+) |
| G1990581 | NA | non-coding | upstream | 14269 | 3419617 ~ 3421122 (+) |
| G1990544 | NA | non-coding | upstream | 16652 | 3367872 ~ 3418739 (+) |
| G1990539 | NA | non-coding | upstream | 69215 | 3360092 ~ 3366176 (+) |
| G1990540 | NA | non-coding | upstream | 72437 | 3361416 ~ 3362954 (+) |
| G1990589 | NA | non-coding | downstream | 10039 | 3445643 ~ 3445848 (+) |
| G1990580 | LOC106562804 | non-coding | downstream | 40036 | 3475640 ~ 3478080 (+) |
| G1990639 | NA | non-coding | downstream | 148628 | 3584232 ~ 3584497 (+) |
| G1990652 | NA | non-coding | downstream | 190125 | 3625729 ~ 3626046 (+) |
| G1990656 | NA | non-coding | downstream | 200547 | 3636151 ~ 3636923 (+) |
| G1990075 | NA | other | upstream | 410915 | 3022763 ~ 3024476 (+) |
| G1990148 | NA | other | upstream | 464509 | 2966262 ~ 2970882 (+) |
| G1990054 | NA | other | upstream | 701851 | 2731552 ~ 2733540 (+) |
| G1990024 | NA | other | upstream | 778819 | 2656073 ~ 2656572 (+) |
| G1990611 | LOC106588037 | other | downstream | 46350 | 3481954 ~ 3490415 (+) |
| G1990736 | NA | other | downstream | 409736 | 3845340 ~ 3846512 (+) |
| G1990964 | NA | other | downstream | 534211 | 3969815 ~ 3970118 (+) |
| LOC110517761 | LOC106588045 | other | downstream | 540490 | 3975460 ~ 4053666 (+) |
