Gene
RNA
| Item | Value |
|---|---|
| gene id | G1990783 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 3470742 ~ 3471403 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: putative protein TPRXL, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2277376 | True | 280 | lncRNA | 0.39 | 2 | 3470742 | 3471403 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118944414 | NA | coding | downstream | 284950 | 3183940 ~ 3186858 (-) |
| LOC118944401 | LOC106588129 | coding | downstream | 353499 | 2958963 ~ 3117243 (-) |
| LOC118944482 | LOC106588022 | coding | downstream | 565059 | 2856093 ~ 2905683 (-) |
| LOC118944483 | NA | coding | downstream | 596902 | 2871334 ~ 2873840 (-) |
| LOC110519438 | plekhg4 | coding | downstream | 684260 | 2589463 ~ 2786486 (-) |
| LOC110506223 | LOC106588037 | coding | upstream | 5755 | 3477158 ~ 3492750 (-) |
| LOC110516700 | LOC106591035 | coding | upstream | 602642 | 4074045 ~ 4158044 (-) |
| LOC110498670 | anx2a | coding | upstream | 898979 | 4370382 ~ 4390993 (-) |
| LOC118944435 | LOC106588010 | coding | upstream | 968430 | 4439833 ~ 4700484 (-) |
| LOC110526851 | vps13c | coding | upstream | 1247249 | 4718652 ~ 4972108 (-) |
| G1990776 | NA | non-coding | downstream | 23195 | 3447347 ~ 3447547 (-) |
| G1990774 | NA | non-coding | downstream | 39814 | 3430538 ~ 3430928 (-) |
| G1990773 | NA | non-coding | downstream | 40452 | 3429814 ~ 3430290 (-) |
| G1990770 | NA | non-coding | downstream | 45882 | 3424448 ~ 3424860 (-) |
| G1990537 | NA | non-coding | downstream | 112055 | 3358400 ~ 3358687 (-) |
| G1990784 | NA | non-coding | upstream | 8354 | 3479757 ~ 3480183 (-) |
| G1990806 | NA | non-coding | upstream | 84979 | 3556382 ~ 3558006 (-) |
| G1990817 | NA | non-coding | upstream | 116125 | 3587528 ~ 3588034 (-) |
| G1990823 | NA | non-coding | upstream | 148839 | 3620242 ~ 3621467 (-) |
| G1990828 | NA | non-coding | upstream | 158464 | 3629867 ~ 3630214 (-) |
| G1990495 | LOC106562810 | other | downstream | 182244 | 3287167 ~ 3288498 (-) |
| G1990296 | NA | other | downstream | 514223 | 2955410 ~ 2956519 (-) |
| LOC118944543 | NA | other | downstream | 984148 | 2478242 ~ 2486594 (-) |
| G1990760 | LOC100379111 | other | upstream | 31548 | 3502951 ~ 3515660 (-) |
| G1990907 | NA | other | upstream | 338802 | 3810205 ~ 3810560 (-) |
| G1990926 | NA | other | upstream | 401197 | 3872600 ~ 3873176 (-) |
| G1990927 | LOC106591093 | other | upstream | 403512 | 3873304 ~ 3880013 (-) |
