Gene
RNA
| Item | Value |
|---|---|
| gene id | G1990656 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 3636151 ~ 3636923 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2277217 | False | 478 | lncRNA | 0.46 | 2 | 3636151 | 3636923 |
| TU2277218 | True | 464 | lncRNA | 0.46 | 2 | 3636151 | 3636923 |
3,633,200
3,633,600
3,634,000
3,634,400
3,634,800
3,635,200
3,635,600
3,636,000
3,636,400
3,636,800
3,637,200
3,637,600
3,638,000
3,638,400
3,638,800
NC_048590.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110507010 | LOC100379111 | coding | upstream | 130102 | 3502926 ~ 3506049 (+) |
| LOC110507004 | LOC106588039 | coding | upstream | 139673 | 3491895 ~ 3496478 (+) |
| LOC110516197 | LOC106588136 | coding | upstream | 315800 | 3121914 ~ 3321478 (+) |
| LOC118944541 | NA | coding | upstream | 1010729 | 2624750 ~ 2625422 (+) |
| LOC118936601 | LOC106588035 | coding | upstream | 1190285 | 2411461 ~ 2445866 (+) |
| LOC110518574 | LOC106588131 | coding | downstream | 236407 | 3873330 ~ 3932334 (+) |
| LOC110518573 | LOC106592649 | coding | downstream | 297477 | 3934400 ~ 3965539 (+) |
| trnat-agu-149 | NA | coding | downstream | 336392 | 3973315 ~ 3973388 (+) |
| trnat-agu-150 | NA | coding | downstream | 337442 | 3974365 ~ 3974438 (+) |
| LOC110517761 | LOC106588045 | coding | downstream | 338537 | 3975460 ~ 4053666 (+) |
| G1990652 | NA | non-coding | upstream | 10105 | 3625729 ~ 3626046 (+) |
| G1990639 | NA | non-coding | upstream | 51654 | 3584232 ~ 3584497 (+) |
| G1990580 | LOC106562804 | non-coding | upstream | 158071 | 3475640 ~ 3478080 (+) |
| G1990589 | NA | non-coding | upstream | 190303 | 3445643 ~ 3445848 (+) |
| G1990588 | NA | non-coding | upstream | 200547 | 3435391 ~ 3435604 (+) |
| G1990657 | NA | non-coding | downstream | 146 | 3637069 ~ 3637399 (+) |
| G1990663 | NA | non-coding | downstream | 25249 | 3662172 ~ 3731674 (+) |
| G1990691 | NA | non-coding | downstream | 110550 | 3747473 ~ 3748032 (+) |
| G1990692 | NA | non-coding | downstream | 111579 | 3748502 ~ 3749020 (+) |
| G1990695 | NA | non-coding | downstream | 119484 | 3756407 ~ 3756703 (+) |
| G1990611 | LOC106588037 | other | upstream | 145736 | 3481954 ~ 3490415 (+) |
| G1990075 | NA | other | upstream | 611675 | 3022763 ~ 3024476 (+) |
| G1990148 | NA | other | upstream | 665269 | 2966262 ~ 2970882 (+) |
| G1990054 | NA | other | upstream | 902611 | 2731552 ~ 2733540 (+) |
| G1990736 | NA | other | downstream | 208417 | 3845340 ~ 3846512 (+) |
| G1990964 | NA | other | downstream | 332892 | 3969815 ~ 3970118 (+) |
| G1991499 | NA | other | downstream | 1090944 | 4727867 ~ 4729681 (+) |
