Gene
RNA
| Item | Value |
|---|---|
| gene id | G1990909 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 3817387 ~ 3818053 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2277526 | True | 311 | lncRNA | 0.54 | 2 | 3817387 | 3818053 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110506223 | LOC106588037 | coding | downstream | 324637 | 3477158 ~ 3492750 (-) |
| LOC118944414 | NA | coding | downstream | 631595 | 3183940 ~ 3186858 (-) |
| LOC118944401 | LOC106588129 | coding | downstream | 700144 | 2958963 ~ 3117243 (-) |
| LOC118944482 | LOC106588022 | coding | downstream | 911704 | 2856093 ~ 2905683 (-) |
| LOC110516700 | LOC106591035 | coding | upstream | 255992 | 4074045 ~ 4158044 (-) |
| LOC110498670 | anx2a | coding | upstream | 552329 | 4370382 ~ 4390993 (-) |
| LOC118944435 | LOC106588010 | coding | upstream | 621780 | 4439833 ~ 4700484 (-) |
| LOC110526851 | vps13c | coding | upstream | 900599 | 4718652 ~ 4972108 (-) |
| LOC118944456 | NA | coding | upstream | 921863 | 4739916 ~ 4741747 (-) |
| G1990903 | NA | non-coding | downstream | 14621 | 3802542 ~ 3802766 (-) |
| G1990897 | NA | non-coding | downstream | 22815 | 3792853 ~ 3794572 (-) |
| G1990895 | NA | non-coding | downstream | 32173 | 3785003 ~ 3785214 (-) |
| G1990894 | NA | non-coding | downstream | 34430 | 3782726 ~ 3782957 (-) |
| G1990893 | NA | non-coding | downstream | 34817 | 3781307 ~ 3782570 (-) |
| G1990911 | NA | non-coding | upstream | 5000 | 3823053 ~ 3823329 (-) |
| G1990913 | NA | non-coding | upstream | 8999 | 3827052 ~ 3836792 (-) |
| G1990919 | NA | non-coding | upstream | 36929 | 3854982 ~ 3857852 (-) |
| G1990924 | NA | non-coding | upstream | 48587 | 3866640 ~ 3866946 (-) |
| G1990927 | LOC106591093 | non-coding | upstream | 55251 | 3873304 ~ 3880013 (-) |
| G1990907 | NA | other | downstream | 6827 | 3810205 ~ 3810560 (-) |
| G1990760 | LOC100379111 | other | downstream | 301727 | 3502951 ~ 3515660 (-) |
| G1990495 | LOC106562810 | other | downstream | 528889 | 3287167 ~ 3288498 (-) |
| G1990926 | NA | other | upstream | 54547 | 3872600 ~ 3873176 (-) |
| G1991381 | NA | other | upstream | 655229 | 4473282 ~ 4473617 (-) |
