G1990970


Basic Information

Item Value
gene id G1990970
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 3989630 ~ 3992142 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2277615
acatagaggggacaggagagaggttatcaccatcaggtaacaacatagaggggacaggagagaggttatcaccatcaggtaacatagaggggggcaggagagaggttatcaccatcaggtaacaacatagagggggacaggagagaggttatcaccatcaggtaacagagagggggacaggagagaggttatcaccatcaggtaacatagaggggacaggggagaggttatcaccatcaggtaacaacatagaggggacaggagagaggttatcaccatcaggtaacatagaggggacaggggagaggttatcaccatcaggtaacaacatagaggggacaggagagaggttatcaccatcaggtaacatagagggggacaggagagaggttatcaccatcaggtaacaccatagagggggacaggagagaggttatcaccatcaggtaacatagagggggacaggagagaggttatcaccatcaggtaacagaggggacaggggagaggttatcaccatcaggtaacaacatagaggggacaggagagaggttatcaccatcaggtaacatagagggggacaggagagaggttatcaccatcaggtaacatagagggacaggagagaggttatcgcCATCAGGTAACAacatagaggggacaggagagaggttatcaccatcaggtaacatagagggggacaggagagaggttatcaccatcaggtaacaatatagaggggacaggagagaggttatcaccatcaggtaacatagaggggacaggagagaggttatcaccatcaggtaacatagaggggacaggagagaggttatcaccatcaggtaacatagagggggacaggagagaggttatcaccatcaggtaacatatagggggacaggagagaggttatcaccatcaggtaacatagagggacaggagagaggttatcgcCATCAGGTAACAacatagaggggacaggagagaggttatcaccatcaggtaacatagagggggacaggagagaggttatcaccatcaggtaacaatatagaggggacaggagagaggttatcaccatcaggtaacatagaggggacaggagagaggttattaCCACCAGGTAacatagaggggacaggagagaggttatcaccatcaggtaacatagagggggacaggagagaggttatcaccatcaggtaacatagagggggacaagagagaggttatcaccatcaggtaacatagagggggacaggagagaggttatcaccatcaggtaacattgagggggacaggagagaggttatcaccatcaggtaacagaggggacaggagagaggttatcaccatcaggtaacatagAGGAGACGGaagagaggttatcaccatcaggtaacaacatagagggggacaggagagaggttatcaccatcaggtaacatagaggggacagaagagaggttatcaccatcaggtaacatagaggggacaggagagaggttatcaccatcaggtaacatagaggggacaggagagaggttatcaccatcaggtaacaacatagaggggacaggagagaggttatcaccatcaggtaacatagaggggacaggagagaggttatcaccatcaggtaacaacatagagggggacaggagagaggttatcaccatcaggtaacatagaggagacaggagagaggttatcaccatcaggtaacatagaggggacaggagagaggttatcaccatcaggtaacatagATGAGATGGGAGAaaggttatcaccatcaggtaacaacatagaggggagaggagagaggttatcaccatcaggtaacataTAGggggacaagagagaggttatcaccatcaggcAACAACAtaggggggacaggagagaggttatcaccatcaggtaacatagagggggacaggagagaggttatcaccatcaggtaacatagagggggacaggagagaggttatcaccatcaggtaacagaggggacaggggagaggttatcaccatcaggtaacatagaggggacaggagagaggttatcaccatcaggtaacagaggggcaggagagaggtTATTACCACCAGGTaacatagagaggacaggagagaggttatcactATTAGGTAACATAGAGGAGACgggagagaggttatcaccatcaggtaacatagaggggacaggagagaggttatcccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2277615 True 2230 lncRNA 0.49 4 3989630 3992142

Neighbor

gene id symbol gene type direction distance location
trnat-agu-150 NA coding upstream 15192 3974365 ~ 3974438 (+)
trnat-agu-149 NA coding upstream 16242 3973315 ~ 3973388 (+)
LOC110518573 LOC106592649 coding upstream 24091 3934400 ~ 3965539 (+)
LOC110518574 LOC106588131 coding upstream 57296 3873330 ~ 3932334 (+)
LOC110507010 LOC100379111 coding upstream 483581 3502926 ~ 3506049 (+)
LOC118944442 rhpn2 coding downstream 258869 4251011 ~ 4313398 (+)
LOC118944494 NA coding downstream 322808 4314950 ~ 4317909 (+)
LOC118944549 NA coding downstream 343037 4335175 ~ 4339901 (+)
LOC118944447 NA coding downstream 443231 4435373 ~ 4435794 (+)
LOC118936259 rbhce1 coding downstream 664166 4656308 ~ 4657934 (+)
G1990965 NA non-coding upstream 19020 3970164 ~ 3970610 (+)
G1990963 NA non-coding upstream 20060 3969334 ~ 3969570 (+)
G1990753 NA non-coding upstream 69076 3916795 ~ 3920554 (+)
G1990743 NA non-coding upstream 113659 3875317 ~ 3875971 (+)
G1990990 NA non-coding downstream 63506 4055648 ~ 4057898 (+)
G1991006 NA non-coding downstream 68633 4060775 ~ 4063103 (+)
G1991008 LOC106591036 non-coding downstream 74895 4067037 ~ 4074222 (+)
G1991010 NA non-coding downstream 84008 4076150 ~ 4081026 (+)
G1991011 NA non-coding downstream 95273 4087415 ~ 4087955 (+)
G1990964 NA other upstream 19512 3969815 ~ 3970118 (+)
G1990736 NA other upstream 143118 3845340 ~ 3846512 (+)
G1990611 LOC106588037 other upstream 499215 3481954 ~ 3490415 (+)
LOC110516197 LOC106588136 other upstream 668152 3121914 ~ 3321478 (+)
G1991499 NA other downstream 735725 4727867 ~ 4729681 (+)
G1991530 vps13c other downstream 790575 4780200 ~ 4785531 (+)
LOC118944433 LOC106588021 other downstream 1198034 5147713 ~ 5210329 (+)
G1991766 NA other downstream 1288058 5280200 ~ 5281606 (+)
G1991779 NA other downstream 1309103 5301245 ~ 5302152 (+)

Expression

G1990970 Expression in all Baseline Samples

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G1990970 Expression in each Bioproject

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G1990970 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 100.
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Co-expression Network