Gene
RNA
| Item | Value |
|---|---|
| gene id | G1991398 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 4499703 ~ 4500245 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2278260 | True | 332 | lncRNA | 0.54 | 2 | 4499703 | 4500245 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110498670 | anx2a | coding | downstream | 108710 | 4370382 ~ 4390993 (-) |
| LOC110516700 | LOC106591035 | coding | downstream | 341659 | 4074045 ~ 4158044 (-) |
| LOC110506223 | LOC106588037 | coding | downstream | 1006953 | 3477158 ~ 3492750 (-) |
| LOC118944414 | NA | coding | downstream | 1313911 | 3183940 ~ 3186858 (-) |
| LOC118944401 | LOC106588129 | coding | downstream | 1382460 | 2958963 ~ 3117243 (-) |
| LOC110526851 | vps13c | coding | upstream | 218407 | 4718652 ~ 4972108 (-) |
| LOC118944456 | NA | coding | upstream | 239671 | 4739916 ~ 4741747 (-) |
| LOC110525056 | LOC106592677 | coding | upstream | 473544 | 4973789 ~ 4975290 (-) |
| LOC110515683 | LOC105025469 | coding | upstream | 543535 | 5043780 ~ 5086440 (-) |
| LOC110515681 | agrp1 | coding | upstream | 643486 | 5143731 ~ 5147310 (-) |
| G1991392 | NA | non-coding | downstream | 8121 | 4491226 ~ 4491582 (-) |
| G1991390 | NA | non-coding | downstream | 12752 | 4485582 ~ 4486951 (-) |
| G1991370 | NA | non-coding | downstream | 45761 | 4453029 ~ 4453942 (-) |
| G1991351 | NA | non-coding | downstream | 64364 | 4434859 ~ 4435339 (-) |
| G1991352 | NA | non-coding | downstream | 70585 | 4428912 ~ 4429118 (-) |
| G1991399 | NA | non-coding | upstream | 4393 | 4504638 ~ 4505167 (-) |
| G1991400 | NA | non-coding | upstream | 5429 | 4505674 ~ 4507545 (-) |
| G1991407 | NA | non-coding | upstream | 18630 | 4518875 ~ 4519139 (-) |
| G1991408 | NA | non-coding | upstream | 19772 | 4520017 ~ 4520482 (-) |
| G1991409 | NA | non-coding | upstream | 22320 | 4522565 ~ 4522804 (-) |
| G1991382 | NA | other | downstream | 25439 | 4473753 ~ 4474264 (-) |
| G1991381 | NA | other | downstream | 26086 | 4473282 ~ 4473617 (-) |
| G1990927 | LOC106591093 | other | downstream | 619690 | 3873304 ~ 3880013 (-) |
| G1990926 | NA | other | downstream | 626527 | 3872600 ~ 3873176 (-) |
| G1991436 | NA | other | upstream | 86482 | 4586727 ~ 4587870 (-) |
| G1991846 | NA | other | upstream | 757477 | 5257722 ~ 5259782 (-) |
| G1992375 | NA | other | upstream | 1208023 | 5708268 ~ 5708684 (-) |
