Gene
RNA
| Item | Value |
|---|---|
| gene id | G1991436 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 4586727 ~ 4587870 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2278312 | False | 487 | TUCP | 0.35 | 3 | 4586727 | 4587870 |
| TU2278314 | True | 271 | lncRNA | 0.35 | 2 | 4587351 | 4587870 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110498670 | anx2a | coding | downstream | 196358 | 4370382 ~ 4390993 (-) |
| LOC110516700 | LOC106591035 | coding | downstream | 429307 | 4074045 ~ 4158044 (-) |
| LOC110506223 | LOC106588037 | coding | downstream | 1094601 | 3477158 ~ 3492750 (-) |
| LOC118944414 | NA | coding | downstream | 1401559 | 3183940 ~ 3186858 (-) |
| LOC118944401 | LOC106588129 | coding | downstream | 1470108 | 2958963 ~ 3117243 (-) |
| LOC110526851 | vps13c | coding | upstream | 130782 | 4718652 ~ 4972108 (-) |
| LOC118944456 | NA | coding | upstream | 152046 | 4739916 ~ 4741747 (-) |
| LOC110525056 | LOC106592677 | coding | upstream | 385919 | 4973789 ~ 4975290 (-) |
| LOC110515683 | LOC105025469 | coding | upstream | 455910 | 5043780 ~ 5086440 (-) |
| LOC110515681 | agrp1 | coding | upstream | 555861 | 5143731 ~ 5147310 (-) |
| G1991435 | NA | non-coding | downstream | 2977 | 4584170 ~ 4584374 (-) |
| G1991420 | NA | non-coding | downstream | 42610 | 4542742 ~ 4544741 (-) |
| G1991418 | NA | non-coding | downstream | 47611 | 4538084 ~ 4539740 (-) |
| G1991415 | NA | non-coding | downstream | 53522 | 4533235 ~ 4533829 (-) |
| G1991412 | NA | non-coding | downstream | 59150 | 4527774 ~ 4528201 (-) |
| G1991437 | NA | non-coding | upstream | 504 | 4588374 ~ 4588643 (-) |
| G1991452 | NA | non-coding | upstream | 27380 | 4615250 ~ 4616347 (-) |
| G1991467 | NA | non-coding | upstream | 66613 | 4654483 ~ 4654916 (-) |
| G1991470 | NA | non-coding | upstream | 67217 | 4655087 ~ 4663046 (-) |
| G1991468 | rbhce1 | non-coding | upstream | 69112 | 4656982 ~ 4689748 (-) |
| LOC118944435 | LOC106588010 | other | downstream | 82991 | 4439833 ~ 4700484 (-) |
| G1991382 | NA | other | downstream | 113087 | 4473753 ~ 4474264 (-) |
| G1991381 | NA | other | downstream | 113734 | 4473282 ~ 4473617 (-) |
| G1990927 | LOC106591093 | other | downstream | 707338 | 3873304 ~ 3880013 (-) |
| G1991846 | NA | other | upstream | 669852 | 5257722 ~ 5259782 (-) |
| G1992375 | NA | other | upstream | 1120398 | 5708268 ~ 5708684 (-) |
| G1992485 | NA | other | upstream | 1398561 | 5986431 ~ 5988773 (-) |
