Gene
RNA
| Item | Value |
|---|---|
| gene id | G1991477 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 4695767 ~ 4696380 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2278379 | False | 248 | lncRNA | 0.53 | 4 | 4695767 | 4696380 |
| TU2278380 | True | 208 | lncRNA | 0.53 | 2 | 4695767 | 4696202 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110498670 | anx2a | coding | downstream | 304774 | 4370382 ~ 4390993 (-) |
| LOC110516700 | LOC106591035 | coding | downstream | 537723 | 4074045 ~ 4158044 (-) |
| LOC110506223 | LOC106588037 | coding | downstream | 1203017 | 3477158 ~ 3492750 (-) |
| LOC118944414 | NA | coding | downstream | 1509975 | 3183940 ~ 3186858 (-) |
| LOC118944401 | LOC106588129 | coding | downstream | 1578524 | 2958963 ~ 3117243 (-) |
| LOC110526851 | vps13c | coding | upstream | 22272 | 4718652 ~ 4972108 (-) |
| LOC118944456 | NA | coding | upstream | 43536 | 4739916 ~ 4741747 (-) |
| LOC110525056 | LOC106592677 | coding | upstream | 277409 | 4973789 ~ 4975290 (-) |
| LOC110515683 | LOC105025469 | coding | upstream | 347400 | 5043780 ~ 5086440 (-) |
| LOC110515681 | agrp1 | coding | upstream | 447351 | 5143731 ~ 5147310 (-) |
| G1991476 | NA | non-coding | downstream | 3188 | 4691613 ~ 4692579 (-) |
| G1991468 | rbhce1 | non-coding | downstream | 6019 | 4656982 ~ 4689748 (-) |
| G1991473 | NA | non-coding | downstream | 7281 | 4685132 ~ 4688486 (-) |
| G1991470 | NA | non-coding | downstream | 32721 | 4655087 ~ 4663046 (-) |
| G1991467 | NA | non-coding | downstream | 40851 | 4654483 ~ 4654916 (-) |
| G1991480 | NA | non-coding | upstream | 4163 | 4700543 ~ 4700835 (-) |
| G1991484 | NA | non-coding | upstream | 7477 | 4703857 ~ 4705474 (-) |
| G1991489 | NA | non-coding | upstream | 13864 | 4710244 ~ 4711694 (-) |
| G1991491 | NA | non-coding | upstream | 16250 | 4712630 ~ 4712920 (-) |
| G1991594 | NA | non-coding | upstream | 19521 | 4715901 ~ 4716864 (-) |
| G1991436 | NA | other | downstream | 107897 | 4586727 ~ 4587870 (-) |
| LOC118944435 | LOC106588010 | other | downstream | 191407 | 4439833 ~ 4700484 (-) |
| G1991382 | NA | other | downstream | 221503 | 4473753 ~ 4474264 (-) |
| G1991381 | NA | other | downstream | 222150 | 4473282 ~ 4473617 (-) |
| G1991846 | NA | other | upstream | 561342 | 5257722 ~ 5259782 (-) |
| G1992375 | NA | other | upstream | 1011888 | 5708268 ~ 5708684 (-) |
| G1992485 | NA | other | upstream | 1290051 | 5986431 ~ 5988773 (-) |
