Gene
RNA
| Item | Value |
|---|---|
| gene id | G1991622 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 4829417 ~ 4830193 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2278568 | True | 270 | lncRNA | 0.49 | 2 | 4829417 | 4830193 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118944456 | NA | coding | downstream | 87670 | 4739916 ~ 4741747 (-) |
| LOC118944435 | LOC106588010 | coding | downstream | 128933 | 4439833 ~ 4700484 (-) |
| LOC110498670 | anx2a | coding | downstream | 438424 | 4370382 ~ 4390993 (-) |
| LOC110516700 | LOC106591035 | coding | downstream | 671373 | 4074045 ~ 4158044 (-) |
| LOC110506223 | LOC106588037 | coding | downstream | 1336667 | 3477158 ~ 3492750 (-) |
| LOC110525056 | LOC106592677 | coding | upstream | 143596 | 4973789 ~ 4975290 (-) |
| LOC110515683 | LOC105025469 | coding | upstream | 213587 | 5043780 ~ 5086440 (-) |
| LOC110515681 | agrp1 | coding | upstream | 313538 | 5143731 ~ 5147310 (-) |
| LOC118944412 | LOC100135822 | coding | upstream | 419086 | 5249279 ~ 5301650 (-) |
| usp8 | LOC106592072 | coding | upstream | 832383 | 5662576 ~ 5697259 (-) |
| G1991621 | NA | non-coding | downstream | 3513 | 4825644 ~ 4825904 (-) |
| G1991619 | NA | non-coding | downstream | 12099 | 4816737 ~ 4817318 (-) |
| G1991618 | NA | non-coding | downstream | 20816 | 4807793 ~ 4808601 (-) |
| G1991617 | NA | non-coding | downstream | 24274 | 4803360 ~ 4805143 (-) |
| G1991613 | NA | non-coding | downstream | 32454 | 4796595 ~ 4796963 (-) |
| G1991626 | NA | non-coding | upstream | 7178 | 4837371 ~ 4837688 (-) |
| G1991628 | NA | non-coding | upstream | 12358 | 4842551 ~ 4843396 (-) |
| G1991630 | NA | non-coding | upstream | 15758 | 4845951 ~ 4846153 (-) |
| G1991632 | NA | non-coding | upstream | 27361 | 4857554 ~ 4857806 (-) |
| G1991633 | NA | non-coding | upstream | 28084 | 4858277 ~ 4858480 (-) |
| G1991436 | NA | other | downstream | 241547 | 4586727 ~ 4587870 (-) |
| G1991382 | NA | other | downstream | 355153 | 4473753 ~ 4474264 (-) |
| G1991381 | NA | other | downstream | 355800 | 4473282 ~ 4473617 (-) |
| LOC110526851 | vps13c | other | upstream | 19044 | 4718652 ~ 4972108 (-) |
| G1991846 | NA | other | upstream | 427529 | 5257722 ~ 5259782 (-) |
| G1992375 | NA | other | upstream | 878075 | 5708268 ~ 5708684 (-) |
| G1992485 | NA | other | upstream | 1156238 | 5986431 ~ 5988773 (-) |
