G1991628


Basic Information

Item Value
gene id G1991628
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 4842551 ~ 4843396 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2278578
gtattgatgtGTCTCAGTAGTTATAGTAGGATCCTAGTAgtaggtatctgtattgatgtGACTCAGTAGTTCTAGTTGTATCTGTATTGATGTGACTCAGAAGTTCTAGTTGTATCTGTATTGATGTGACTCAGTAGTTCTAGTTGTATCTGTATTGATGTGACTCAGAAGTTCTAGTTGTATCTGTATTGATGTGACTCAGAAGTTCTAGTTgtaggtatctgtattgatgtGACTCAGAAGTTCTAGTTGTATCTGTATTGATGTGACTCAGAAGTTCTAGTTGTATCTGTATTGATGTGACTCAGAAGTTCTAGTTgtaggtatctgtattgatgtagtagtaggtatctgtattgatgtagTTCTAGTGGGATCCTAGTAgtaggtatctgtattgatgtGACTCAGTAGTTCTAgtaggtatctgtattgatgtgactcagtagttctagtagtaggtatctgtattgatgtGACTCAGTAGTTCTAGTTgtaggtatctgtattgatgtagTTCTAGTGGGATCCTAGTAgtaggtatctgtattgatgtagTTCTAGTGGGATCCTAGTAgtaggtatctgtattgatgtagTTCTAGTGGGATCCTAGTAgtaggtatctgtattgatgtGACTCAGTAGTTCTATTAgtaggtatctgtat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2278578 True 670 lncRNA 0.37 2 4842551 4843396

Neighbor

gene id symbol gene type direction distance location
LOC118944456 NA coding downstream 100804 4739916 ~ 4741747 (-)
LOC118944435 LOC106588010 coding downstream 142067 4439833 ~ 4700484 (-)
LOC110498670 anx2a coding downstream 451558 4370382 ~ 4390993 (-)
LOC110516700 LOC106591035 coding downstream 684507 4074045 ~ 4158044 (-)
LOC110506223 LOC106588037 coding downstream 1349801 3477158 ~ 3492750 (-)
LOC110525056 LOC106592677 coding upstream 130393 4973789 ~ 4975290 (-)
LOC110515683 LOC105025469 coding upstream 200384 5043780 ~ 5086440 (-)
LOC110515681 agrp1 coding upstream 300335 5143731 ~ 5147310 (-)
LOC118944412 LOC100135822 coding upstream 405883 5249279 ~ 5301650 (-)
usp8 LOC106592072 coding upstream 819180 5662576 ~ 5697259 (-)
G1991626 NA non-coding downstream 4863 4837371 ~ 4837688 (-)
G1991622 NA non-coding downstream 12358 4829417 ~ 4830193 (-)
G1991621 NA non-coding downstream 16647 4825644 ~ 4825904 (-)
G1991619 NA non-coding downstream 25233 4816737 ~ 4817318 (-)
G1991618 NA non-coding downstream 33950 4807793 ~ 4808601 (-)
G1991630 NA non-coding upstream 2555 4845951 ~ 4846153 (-)
G1991632 NA non-coding upstream 14158 4857554 ~ 4857806 (-)
G1991633 NA non-coding upstream 14881 4858277 ~ 4858480 (-)
G1991634 NA non-coding upstream 22169 4865565 ~ 4866040 (-)
G1991635 NA non-coding upstream 23117 4866513 ~ 4866843 (-)
G1991436 NA other downstream 254681 4586727 ~ 4587870 (-)
G1991382 NA other downstream 368287 4473753 ~ 4474264 (-)
G1991381 NA other downstream 368934 4473282 ~ 4473617 (-)
LOC110526851 vps13c other upstream 5841 4718652 ~ 4972108 (-)
G1991846 NA other upstream 414326 5257722 ~ 5259782 (-)
G1992375 NA other upstream 864872 5708268 ~ 5708684 (-)
G1992485 NA other upstream 1143035 5986431 ~ 5988773 (-)

Expression


Co-expression Network