Gene
RNA
| Item | Value |
|---|---|
| gene id | G1991711 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 5097187 ~ 5098290 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2278699 | True | 373 | lncRNA | 0.54 | 2 | 5097187 | 5098290 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110515683 | LOC105025469 | coding | downstream | 10747 | 5043780 ~ 5086440 (-) |
| LOC110525056 | LOC106592677 | coding | downstream | 121897 | 4973789 ~ 4975290 (-) |
| LOC110526851 | vps13c | coding | downstream | 125079 | 4718652 ~ 4972108 (-) |
| LOC118944456 | NA | coding | downstream | 355440 | 4739916 ~ 4741747 (-) |
| LOC118944435 | LOC106588010 | coding | downstream | 396703 | 4439833 ~ 4700484 (-) |
| LOC110515681 | agrp1 | coding | upstream | 45441 | 5143731 ~ 5147310 (-) |
| LOC118944412 | LOC100135822 | coding | upstream | 150989 | 5249279 ~ 5301650 (-) |
| usp8 | LOC106592072 | coding | upstream | 564286 | 5662576 ~ 5697259 (-) |
| LOC110514656 | LOC106593544 | coding | upstream | 651236 | 5749526 ~ 5761005 (-) |
| LOC110514841 | LOC106593544 | coding | upstream | 678732 | 5777022 ~ 5793342 (-) |
| G1991699 | NA | non-coding | downstream | 40044 | 5056144 ~ 5057143 (-) |
| G1991690 | NA | non-coding | downstream | 108794 | 4987721 ~ 4988393 (-) |
| G1991688 | NA | non-coding | downstream | 123473 | 4973265 ~ 4973714 (-) |
| G1991650 | NA | non-coding | downstream | 132382 | 4963447 ~ 4964805 (-) |
| G1991649 | NA | non-coding | downstream | 137649 | 4958934 ~ 4959538 (-) |
| G1991722 | NA | non-coding | upstream | 25837 | 5124127 ~ 5124802 (-) |
| G1991807 | NA | non-coding | upstream | 29513 | 5127803 ~ 5210329 (-) |
| G1991806 | NA | non-coding | upstream | 32150 | 5130440 ~ 5131153 (-) |
| G1991813 | NA | non-coding | upstream | 44383 | 5142673 ~ 5143646 (-) |
| G1991823 | NA | non-coding | upstream | 86204 | 5184494 ~ 5185780 (-) |
| G1991436 | NA | other | downstream | 509317 | 4586727 ~ 4587870 (-) |
| G1991846 | NA | other | upstream | 159432 | 5257722 ~ 5259782 (-) |
| G1992375 | NA | other | upstream | 609978 | 5708268 ~ 5708684 (-) |
| G1992485 | NA | other | upstream | 888141 | 5986431 ~ 5988773 (-) |
| LOC118936596 | LOC106591161 | other | upstream | 1298754 | 6391414 ~ 6444276 (-) |
| G1994075 | NA | other | upstream | 2290955 | 7389245 ~ 7389568 (-) |
