G1991852



Basic Information


Item Value
gene id G1991852
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 5271272 ~ 5271854 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2278967
CACAGGAGAGGACACGGCCAGCACACGACCAGGACATGGCCAGGACACGggatagtagtgcactaccatagggccctggtctaaagtagtgcactaccatatggccctggtctaaagtagtgcactaccatagggtcctgttctaaagtagtgcactaccatagggccctggtctaaagtagtgctctaccatatggccctggtctaaagtagtgcactacatagggaatagggtaccattagaGACATATCCTACATGCAGGACAAGACACatgaccaagagagagaga

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2278967 True 290 lncRNA 0.50 2 5271272 5271854

Neighbor


gene id symbol gene type direction distance location
LOC110515681 agrp1 coding downstream 123962 5143731 ~ 5147310 (-)
LOC110515683 LOC105025469 coding downstream 184832 5043780 ~ 5086440 (-)
LOC110525056 LOC106592677 coding downstream 295982 4973789 ~ 4975290 (-)
LOC110526851 vps13c coding downstream 299164 4718652 ~ 4972108 (-)
usp8 LOC106592072 coding upstream 390722 5662576 ~ 5697259 (-)
LOC110514656 LOC106593544 coding upstream 477672 5749526 ~ 5761005 (-)
LOC110514841 LOC106593544 coding upstream 505168 5777022 ~ 5793342 (-)
LOC110519162 s27a2 coding upstream 523234 5795088 ~ 5816747 (-)
LOC110517106 fsd2 coding upstream 777500 6049354 ~ 6099236 (-)
G1991851 NA non-coding downstream 342 5270572 ~ 5270930 (-)
G1991850 NA non-coding downstream 1677 5268690 ~ 5269595 (-)
G1991834 NA non-coding downstream 3175 5215508 ~ 5268097 (-)
G1991808 NA non-coding downstream 61960 5207643 ~ 5209312 (-)
G1991824 NA non-coding downstream 80857 5190174 ~ 5190415 (-)
G1991855 NA non-coding upstream 8306 5280160 ~ 5282745 (-)
G1991877 NA non-coding upstream 109006 5380860 ~ 5381295 (-)
G1991878 NA non-coding upstream 115457 5387311 ~ 5387815 (-)
G1991879 NA non-coding upstream 120919 5392773 ~ 5393119 (-)
G1991894 NA non-coding upstream 156254 5428108 ~ 5428714 (-)
G1991846 NA other downstream 11490 5257722 ~ 5259782 (-)
G1991436 NA other downstream 683402 4586727 ~ 4587870 (-)
G1991382 NA other downstream 797008 4473753 ~ 4474264 (-)
G1992375 NA other upstream 436414 5708268 ~ 5708684 (-)
G1992485 NA other upstream 714577 5986431 ~ 5988773 (-)
LOC118936596 LOC106591161 other upstream 1125190 6391414 ~ 6444276 (-)
G1994075 NA other upstream 2117391 7389245 ~ 7389568 (-)
LOC118936603 LOC106587968 other upstream 2379532 7647283 ~ 7665132 (-)

Expression



Co-expression Network