Gene
RNA
| Item | Value |
|---|---|
| gene id | G1991878 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 5387311 ~ 5387815 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2279007 | True | 413 | lncRNA | 0.39 | 2 | 5387311 | 5387815 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118944412 | LOC100135822 | coding | downstream | 85661 | 5249279 ~ 5301650 (-) |
| LOC110515681 | agrp1 | coding | downstream | 240001 | 5143731 ~ 5147310 (-) |
| LOC110515683 | LOC105025469 | coding | downstream | 300871 | 5043780 ~ 5086440 (-) |
| LOC110525056 | LOC106592677 | coding | downstream | 412021 | 4973789 ~ 4975290 (-) |
| LOC118944456 | NA | coding | downstream | 645564 | 4739916 ~ 4741747 (-) |
| usp8 | LOC106592072 | coding | upstream | 274761 | 5662576 ~ 5697259 (-) |
| LOC110514656 | LOC106593544 | coding | upstream | 361711 | 5749526 ~ 5761005 (-) |
| LOC110514841 | LOC106593544 | coding | upstream | 389207 | 5777022 ~ 5793342 (-) |
| LOC110519162 | s27a2 | coding | upstream | 407273 | 5795088 ~ 5816747 (-) |
| LOC110517106 | fsd2 | coding | upstream | 661539 | 6049354 ~ 6099236 (-) |
| G1991877 | NA | non-coding | downstream | 6016 | 5380860 ~ 5381295 (-) |
| G1991855 | NA | non-coding | downstream | 104566 | 5280160 ~ 5282745 (-) |
| G1991852 | NA | non-coding | downstream | 115457 | 5271272 ~ 5271854 (-) |
| G1991851 | NA | non-coding | downstream | 116381 | 5270572 ~ 5270930 (-) |
| G1991850 | NA | non-coding | downstream | 117716 | 5268690 ~ 5269595 (-) |
| G1991879 | NA | non-coding | upstream | 4958 | 5392773 ~ 5393119 (-) |
| G1991894 | NA | non-coding | upstream | 40293 | 5428108 ~ 5428714 (-) |
| G1991901 | NA | non-coding | upstream | 50544 | 5438359 ~ 5438581 (-) |
| G1991925 | NA | non-coding | upstream | 54439 | 5442254 ~ 5442976 (-) |
| G1991937 | NA | non-coding | upstream | 77901 | 5465716 ~ 5472953 (-) |
| G1991846 | NA | other | downstream | 127529 | 5257722 ~ 5259782 (-) |
| LOC110526851 | vps13c | other | downstream | 533556 | 4718652 ~ 4972108 (-) |
| G1991436 | NA | other | downstream | 799441 | 4586727 ~ 4587870 (-) |
| G1991382 | NA | other | downstream | 913047 | 4473753 ~ 4474264 (-) |
| G1992375 | NA | other | upstream | 320453 | 5708268 ~ 5708684 (-) |
| G1992485 | NA | other | upstream | 598616 | 5986431 ~ 5988773 (-) |
| LOC118936596 | LOC106591161 | other | upstream | 1009229 | 6391414 ~ 6444276 (-) |
| G1994075 | NA | other | upstream | 2001430 | 7389245 ~ 7389568 (-) |
| LOC118936603 | LOC106587968 | other | upstream | 2263571 | 7647283 ~ 7665132 (-) |
