G1991937


Basic Information

Item Value
gene id G1991937
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 5465716 ~ 5472953 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2279071
GCGAGGTCTTGCACATGTGATCAATAACCGCACTATTTCTACATAAAACAGTAAAATCACTGCAATATTAATGCATCAGACTGTATCCCCTTTAACTTCCGTACAAAAAGAGGACTTGTATAATTTCAGACAATCACAGCACATTTACAGCGTgatatacaataccagtcagaagtttgaacaggcctactcattcaaggggcgGCAGAATAGGGTAGGTAgtctagtgtttagagtgttggactagtaaccagcaggtagcctagtggttagagtgttgaaccagtaaccagcaggtagcctagtggttagagtgttgaaccagtaaccagcaggtagcctagtggttagagcgttggaatagtaaccagcaggtagactagtggttagagcgttggaatagtaaccagcaggtagcctagtggttagagtgttggttagtaaccagcaggtagcctagtggttagagcgttggactagtaaccagcaggtagccttgtggttagagtgttggactagtaaccagcaggtaccctagtggttagagtgttggactagtaaccagcaggtagcctagtggttagagtgttgaaccagtaaccagcaggtagcctagtggttagagtgttgaaccagtaaccagcaggtagcctagtggttagagcgttggaatagtaaccagcaggtagactagtggttagagcgttggaatagtaaccagcaggtagcctagtggttagagtgttggttagtaaccagcaggtagcctagtggttagagcgttggactagtaaccagcaggtagccttgtggttagagtgttggactagtaaccagcaggtaccctagtggttagagtgttggactagtaaccagcaggtagcctagtggttagagtgttgaaccagtaaccagcaggtagcctagtggttagagtgttggttagtaaccagcaggtagtctagtggttagagtgttggactagtaaccagc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2279071 True 993 lncRNA 0.46 3 5465716 5472953

Neighbor

gene id symbol gene type direction distance location
LOC118944412 LOC100135822 coding downstream 164066 5249279 ~ 5301650 (-)
LOC110515681 agrp1 coding downstream 318406 5143731 ~ 5147310 (-)
LOC110515683 LOC105025469 coding downstream 379276 5043780 ~ 5086440 (-)
LOC110525056 LOC106592677 coding downstream 490426 4973789 ~ 4975290 (-)
LOC118944456 NA coding downstream 723969 4739916 ~ 4741747 (-)
usp8 LOC106592072 coding upstream 189623 5662576 ~ 5697259 (-)
LOC110514656 LOC106593544 coding upstream 276573 5749526 ~ 5761005 (-)
LOC110514841 LOC106593544 coding upstream 304069 5777022 ~ 5793342 (-)
LOC110519162 s27a2 coding upstream 322135 5795088 ~ 5816747 (-)
LOC110517106 fsd2 coding upstream 576401 6049354 ~ 6099236 (-)
G1991925 NA non-coding downstream 22740 5442254 ~ 5442976 (-)
G1991901 NA non-coding downstream 27135 5438359 ~ 5438581 (-)
G1991894 NA non-coding downstream 37002 5428108 ~ 5428714 (-)
G1991879 NA non-coding downstream 72597 5392773 ~ 5393119 (-)
G1991878 NA non-coding downstream 77901 5387311 ~ 5387815 (-)
G1991944 NA non-coding upstream 15250 5488203 ~ 5488414 (-)
G1991945 NA non-coding upstream 17797 5490750 ~ 5491200 (-)
G1991946 NA non-coding upstream 18268 5491221 ~ 5491430 (-)
G1991947 NA non-coding upstream 18729 5491682 ~ 5492001 (-)
G1991952 NA non-coding upstream 20422 5493375 ~ 5494151 (-)
G1991846 NA other downstream 205934 5257722 ~ 5259782 (-)
LOC110526851 vps13c other downstream 611961 4718652 ~ 4972108 (-)
G1991436 NA other downstream 877846 4586727 ~ 4587870 (-)
G1991382 NA other downstream 991452 4473753 ~ 4474264 (-)
G1992375 NA other upstream 235315 5708268 ~ 5708684 (-)
G1992485 NA other upstream 513478 5986431 ~ 5988773 (-)
LOC118936596 LOC106591161 other upstream 924091 6391414 ~ 6444276 (-)
G1994075 NA other upstream 1916292 7389245 ~ 7389568 (-)
LOC118936603 LOC106587968 other upstream 2178433 7647283 ~ 7665132 (-)

Expression


Co-expression Network