Gene
RNA
| Item | Value |
|---|---|
| gene id | G1991945 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 5490750 ~ 5491200 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2279079 | True | 451 | lncRNA | 0.38 | 1 | 5490750 | 5491200 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118944412 | LOC100135822 | coding | downstream | 189100 | 5249279 ~ 5301650 (-) |
| LOC110515681 | agrp1 | coding | downstream | 343440 | 5143731 ~ 5147310 (-) |
| LOC110515683 | LOC105025469 | coding | downstream | 404310 | 5043780 ~ 5086440 (-) |
| LOC110525056 | LOC106592677 | coding | downstream | 515460 | 4973789 ~ 4975290 (-) |
| LOC118944456 | NA | coding | downstream | 749003 | 4739916 ~ 4741747 (-) |
| usp8 | LOC106592072 | coding | upstream | 171376 | 5662576 ~ 5697259 (-) |
| LOC110514656 | LOC106593544 | coding | upstream | 258326 | 5749526 ~ 5761005 (-) |
| LOC110514841 | LOC106593544 | coding | upstream | 285822 | 5777022 ~ 5793342 (-) |
| LOC110519162 | s27a2 | coding | upstream | 303888 | 5795088 ~ 5816747 (-) |
| LOC110517106 | fsd2 | coding | upstream | 558154 | 6049354 ~ 6099236 (-) |
| G1991944 | NA | non-coding | downstream | 2336 | 5488203 ~ 5488414 (-) |
| G1991937 | NA | non-coding | downstream | 17797 | 5465716 ~ 5472953 (-) |
| G1991925 | NA | non-coding | downstream | 47774 | 5442254 ~ 5442976 (-) |
| G1991901 | NA | non-coding | downstream | 52169 | 5438359 ~ 5438581 (-) |
| G1991894 | NA | non-coding | downstream | 62036 | 5428108 ~ 5428714 (-) |
| G1991946 | NA | non-coding | upstream | 21 | 5491221 ~ 5491430 (-) |
| G1991947 | NA | non-coding | upstream | 482 | 5491682 ~ 5492001 (-) |
| G1991952 | NA | non-coding | upstream | 2175 | 5493375 ~ 5494151 (-) |
| G1991954 | NA | non-coding | upstream | 6859 | 5498059 ~ 5498499 (-) |
| G1991960 | NA | non-coding | upstream | 14672 | 5505872 ~ 5506083 (-) |
| G1991846 | NA | other | downstream | 230968 | 5257722 ~ 5259782 (-) |
| LOC110526851 | vps13c | other | downstream | 636995 | 4718652 ~ 4972108 (-) |
| G1991436 | NA | other | downstream | 902880 | 4586727 ~ 4587870 (-) |
| G1991382 | NA | other | downstream | 1016486 | 4473753 ~ 4474264 (-) |
| G1992375 | NA | other | upstream | 217068 | 5708268 ~ 5708684 (-) |
| G1992485 | NA | other | upstream | 495231 | 5986431 ~ 5988773 (-) |
| LOC118936596 | LOC106591161 | other | upstream | 905844 | 6391414 ~ 6444276 (-) |
| G1994075 | NA | other | upstream | 1898045 | 7389245 ~ 7389568 (-) |
| LOC118936603 | LOC106587968 | other | upstream | 2160186 | 7647283 ~ 7665132 (-) |
