Gene
RNA
| Item | Value |
|---|---|
| gene id | G1991954 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 5498059 ~ 5498499 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106612170, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2279089 | True | 415 | lncRNA | 0.41 | 2 | 5498059 | 5498499 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118944412 | LOC100135822 | coding | downstream | 196409 | 5249279 ~ 5301650 (-) |
| LOC110515681 | agrp1 | coding | downstream | 350749 | 5143731 ~ 5147310 (-) |
| LOC110515683 | LOC105025469 | coding | downstream | 411619 | 5043780 ~ 5086440 (-) |
| LOC110525056 | LOC106592677 | coding | downstream | 522769 | 4973789 ~ 4975290 (-) |
| LOC118944456 | NA | coding | downstream | 756312 | 4739916 ~ 4741747 (-) |
| usp8 | LOC106592072 | coding | upstream | 164077 | 5662576 ~ 5697259 (-) |
| LOC110514656 | LOC106593544 | coding | upstream | 251027 | 5749526 ~ 5761005 (-) |
| LOC110514841 | LOC106593544 | coding | upstream | 278523 | 5777022 ~ 5793342 (-) |
| LOC110519162 | s27a2 | coding | upstream | 296589 | 5795088 ~ 5816747 (-) |
| LOC110517106 | fsd2 | coding | upstream | 550855 | 6049354 ~ 6099236 (-) |
| G1991952 | NA | non-coding | downstream | 3908 | 5493375 ~ 5494151 (-) |
| G1991947 | NA | non-coding | downstream | 6058 | 5491682 ~ 5492001 (-) |
| G1991946 | NA | non-coding | downstream | 6629 | 5491221 ~ 5491430 (-) |
| G1991945 | NA | non-coding | downstream | 6859 | 5490750 ~ 5491200 (-) |
| G1991944 | NA | non-coding | downstream | 9645 | 5488203 ~ 5488414 (-) |
| G1991960 | NA | non-coding | upstream | 7373 | 5505872 ~ 5506083 (-) |
| G1991971 | NA | non-coding | upstream | 23603 | 5522102 ~ 5523880 (-) |
| G1991973 | NA | non-coding | upstream | 27726 | 5526225 ~ 5526463 (-) |
| G1991974 | NA | non-coding | upstream | 48223 | 5546722 ~ 5546933 (-) |
| G1992320 | NA | non-coding | upstream | 83076 | 5581575 ~ 5586274 (-) |
| G1991846 | NA | other | downstream | 238277 | 5257722 ~ 5259782 (-) |
| LOC110526851 | vps13c | other | downstream | 644304 | 4718652 ~ 4972108 (-) |
| G1991436 | NA | other | downstream | 910189 | 4586727 ~ 4587870 (-) |
| G1991382 | NA | other | downstream | 1023795 | 4473753 ~ 4474264 (-) |
| G1992375 | NA | other | upstream | 209769 | 5708268 ~ 5708684 (-) |
| G1992485 | NA | other | upstream | 487932 | 5986431 ~ 5988773 (-) |
| LOC118936596 | LOC106591161 | other | upstream | 898545 | 6391414 ~ 6444276 (-) |
| G1994075 | NA | other | upstream | 1890746 | 7389245 ~ 7389568 (-) |
| LOC118936603 | LOC106587968 | other | upstream | 2152887 | 7647283 ~ 7665132 (-) |
