G1992320


Basic Information

Item Value
gene id G1992320
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 5581575 ~ 5586274 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2279672
aggaGAGAGTGGGAGTAGGGAGCAGCCTGGGAACCCGAGCTGACACTCTATGAGACTTGGCTAGGGAGAAAGTAAACAAGCTAATCAGGCTAAAGCTATAAGAGCAAATGCTAGCTAGATCTAAATGCTTCCTACTGCGTTCCTCCCCAAGGCCACAGCGCAGTTAGGCCACTGGTAGGTCACAGCCGAGGAGCCTCTCAGAGACACAAACAGAGCACCATAGCTGAACACTTAGAGTCGTCCTACAGCAGAAATAAGAGACTGtgttactacagactagtgataaaccataatgttactacagactagtgatgaaccataatgttactacagacagactagtgatgaaccataatgttactacagacagactagtgatgaaccataatgttactacagactagtgatgaaccataatgttactacagactagtgataaaccataatgttactacagactagtgataaaccataatgttactacagactagtgataaaccataatgttactacagactagtgatgaaccataatgttactacagactagtgatgaaccataatgttactacagactagtgatgaaccataatgttactacagacagactagtgatgaaccataatgttactacagactagtgatgaaccataatgttactacagactagtgatgaaccataatgttactacagacagactagtgatgaaccataatgttactacagacagactagtgatgaaccataatgttactacagacagactagtgatgaaccataatgttactacagacagactagtgataaaccataatgttactacagactagtgataaaccataatgttactacagactagtgatgaaccataatgttactacagactagtgataaaccataatgttactacagactagtgatgaaccataatgttactacagacagactagtgatgaaccataatgttactacagactagtgatgaaccataatgttactacagactagtgatgaaccataatgttactacagactagtgatgaaccataatgttactacagactagtgataaaccataatgttactacagactagtgataaaccataatgttactacagacagactagtgataaaccataatgttactacagactagtgatgaaccataatgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2279672 True 1173 lncRNA 0.38 2 5581575 5586274

Neighbor

gene id symbol gene type direction distance location
LOC118944412 LOC100135822 coding downstream 279925 5249279 ~ 5301650 (-)
LOC110515681 agrp1 coding downstream 434265 5143731 ~ 5147310 (-)
LOC110515683 LOC105025469 coding downstream 495135 5043780 ~ 5086440 (-)
LOC110525056 LOC106592677 coding downstream 606285 4973789 ~ 4975290 (-)
LOC118944456 NA coding downstream 839828 4739916 ~ 4741747 (-)
usp8 LOC106592072 coding upstream 76302 5662576 ~ 5697259 (-)
LOC110514656 LOC106593544 coding upstream 163252 5749526 ~ 5761005 (-)
LOC110514841 LOC106593544 coding upstream 190748 5777022 ~ 5793342 (-)
LOC110519162 s27a2 coding upstream 208814 5795088 ~ 5816747 (-)
LOC110517106 fsd2 coding upstream 463080 6049354 ~ 6099236 (-)
G1991974 NA non-coding downstream 34642 5546722 ~ 5546933 (-)
G1991973 NA non-coding downstream 55112 5526225 ~ 5526463 (-)
G1991971 NA non-coding downstream 57695 5522102 ~ 5523880 (-)
G1991960 NA non-coding downstream 75492 5505872 ~ 5506083 (-)
G1991954 NA non-coding downstream 83076 5498059 ~ 5498499 (-)
G1992342 NA non-coding upstream 38000 5624274 ~ 5624481 (-)
G1992343 NA non-coding upstream 38248 5624522 ~ 5625139 (-)
G1992345 NA non-coding upstream 40803 5627077 ~ 5627767 (-)
G1992346 NA non-coding upstream 45579 5631853 ~ 5687556 (-)
G1992351 NA non-coding upstream 49449 5635723 ~ 5651192 (-)
G1991846 NA other downstream 321793 5257722 ~ 5259782 (-)
LOC110526851 vps13c other downstream 727820 4718652 ~ 4972108 (-)
G1991436 NA other downstream 993705 4586727 ~ 4587870 (-)
G1991382 NA other downstream 1107311 4473753 ~ 4474264 (-)
G1992375 NA other upstream 121994 5708268 ~ 5708684 (-)
G1992485 NA other upstream 400157 5986431 ~ 5988773 (-)
LOC118936596 LOC106591161 other upstream 810770 6391414 ~ 6444276 (-)
G1994075 NA other upstream 1802971 7389245 ~ 7389568 (-)
LOC118936603 LOC106587968 other upstream 2065112 7647283 ~ 7665132 (-)

Expression


Co-expression Network