Gene
RNA
| Item | Value |
|---|---|
| gene id | G1992342 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 5624274 ~ 5624481 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2279714 | True | 208 | lncRNA | 0.35 | 1 | 5624274 | 5624481 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118944412 | LOC100135822 | coding | downstream | 322624 | 5249279 ~ 5301650 (-) |
| LOC110515681 | agrp1 | coding | downstream | 476964 | 5143731 ~ 5147310 (-) |
| LOC110515683 | LOC105025469 | coding | downstream | 537834 | 5043780 ~ 5086440 (-) |
| LOC110525056 | LOC106592677 | coding | downstream | 648984 | 4973789 ~ 4975290 (-) |
| LOC118944456 | NA | coding | downstream | 882527 | 4739916 ~ 4741747 (-) |
| usp8 | LOC106592072 | coding | upstream | 38095 | 5662576 ~ 5697259 (-) |
| LOC110514656 | LOC106593544 | coding | upstream | 125045 | 5749526 ~ 5761005 (-) |
| LOC110514841 | LOC106593544 | coding | upstream | 152541 | 5777022 ~ 5793342 (-) |
| LOC110519162 | s27a2 | coding | upstream | 170607 | 5795088 ~ 5816747 (-) |
| LOC110517106 | fsd2 | coding | upstream | 424873 | 6049354 ~ 6099236 (-) |
| G1992311 | NA | non-coding | downstream | 3947 | 5585941 ~ 5620327 (-) |
| G1992320 | NA | non-coding | downstream | 38000 | 5581575 ~ 5586274 (-) |
| G1991974 | NA | non-coding | downstream | 77341 | 5546722 ~ 5546933 (-) |
| G1991973 | NA | non-coding | downstream | 97811 | 5526225 ~ 5526463 (-) |
| G1991971 | NA | non-coding | downstream | 100394 | 5522102 ~ 5523880 (-) |
| G1992343 | NA | non-coding | upstream | 41 | 5624522 ~ 5625139 (-) |
| G1992345 | NA | non-coding | upstream | 2596 | 5627077 ~ 5627767 (-) |
| G1992346 | NA | non-coding | upstream | 7372 | 5631853 ~ 5687556 (-) |
| G1992351 | NA | non-coding | upstream | 11242 | 5635723 ~ 5651192 (-) |
| G1992330 | NA | non-coding | upstream | 33103 | 5657584 ~ 5658412 (-) |
| G1991846 | NA | other | downstream | 364492 | 5257722 ~ 5259782 (-) |
| LOC110526851 | vps13c | other | downstream | 770519 | 4718652 ~ 4972108 (-) |
| G1991436 | NA | other | downstream | 1036404 | 4586727 ~ 4587870 (-) |
| G1991382 | NA | other | downstream | 1150010 | 4473753 ~ 4474264 (-) |
| G1992375 | NA | other | upstream | 83787 | 5708268 ~ 5708684 (-) |
| G1992485 | NA | other | upstream | 361950 | 5986431 ~ 5988773 (-) |
| LOC118936596 | LOC106591161 | other | upstream | 772563 | 6391414 ~ 6444276 (-) |
| G1994075 | NA | other | upstream | 1764764 | 7389245 ~ 7389568 (-) |
| LOC118936603 | LOC106587968 | other | upstream | 2026905 | 7647283 ~ 7665132 (-) |
