Gene
RNA
| Item | Value |
|---|---|
| gene id | G1992346 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 5631853 ~ 5687556 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2279718 | True | 204 | lncRNA | 0.36 | 2 | 5631853 | 5687556 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118944412 | LOC100135822 | coding | downstream | 330203 | 5249279 ~ 5301650 (-) |
| LOC110515681 | agrp1 | coding | downstream | 484543 | 5143731 ~ 5147310 (-) |
| LOC110515683 | LOC105025469 | coding | downstream | 545413 | 5043780 ~ 5086440 (-) |
| LOC110525056 | LOC106592677 | coding | downstream | 656563 | 4973789 ~ 4975290 (-) |
| LOC118944456 | NA | coding | downstream | 890106 | 4739916 ~ 4741747 (-) |
| LOC110514656 | LOC106593544 | coding | upstream | 61970 | 5749526 ~ 5761005 (-) |
| LOC110514841 | LOC106593544 | coding | upstream | 89466 | 5777022 ~ 5793342 (-) |
| LOC110519162 | s27a2 | coding | upstream | 107532 | 5795088 ~ 5816747 (-) |
| LOC110517106 | fsd2 | coding | upstream | 361798 | 6049354 ~ 6099236 (-) |
| LOC118944399 | LOC106562864 | coding | upstream | 457992 | 6145548 ~ 6298226 (-) |
| G1992345 | NA | non-coding | downstream | 4086 | 5627077 ~ 5627767 (-) |
| G1992343 | NA | non-coding | downstream | 6714 | 5624522 ~ 5625139 (-) |
| G1992342 | NA | non-coding | downstream | 7372 | 5624274 ~ 5624481 (-) |
| G1992311 | NA | non-coding | downstream | 11526 | 5585941 ~ 5620327 (-) |
| G1992320 | NA | non-coding | downstream | 45579 | 5581575 ~ 5586274 (-) |
| G1992370 | NA | non-coding | upstream | 11600 | 5699156 ~ 5699870 (-) |
| G1992374 | NA | non-coding | upstream | 20212 | 5707768 ~ 5708019 (-) |
| G1992376 | NA | non-coding | upstream | 21647 | 5709203 ~ 5709665 (-) |
| G1992379 | NA | non-coding | upstream | 28083 | 5715639 ~ 5715992 (-) |
| G1992380 | NA | non-coding | upstream | 29912 | 5717468 ~ 5717687 (-) |
| G1991846 | NA | other | downstream | 372071 | 5257722 ~ 5259782 (-) |
| LOC110526851 | vps13c | other | downstream | 778098 | 4718652 ~ 4972108 (-) |
| G1991436 | NA | other | downstream | 1043983 | 4586727 ~ 4587870 (-) |
| G1991382 | NA | other | downstream | 1157589 | 4473753 ~ 4474264 (-) |
| G1992375 | NA | other | upstream | 20712 | 5708268 ~ 5708684 (-) |
| G1992485 | NA | other | upstream | 298875 | 5986431 ~ 5988773 (-) |
| LOC118936596 | LOC106591161 | other | upstream | 709488 | 6391414 ~ 6444276 (-) |
| G1994075 | NA | other | upstream | 1701689 | 7389245 ~ 7389568 (-) |
| LOC118936603 | LOC106587968 | other | upstream | 1963830 | 7647283 ~ 7665132 (-) |
