G1992370


Basic Information

Item Value
gene id G1992370
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 5699156 ~ 5699870 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2279746
ATGAATTTGTTTGAAAGCCAAAGATGTTGTTACATAAATAATGATTAATGGAGAAGACAGCACAGCAGGCACCCGGGTTGTGAAGGAGTGGATGAGATATTTGTTAATATACTAGCAGTGATGgaacttaaagggatactttgagattttggcaatgaggccctttatgaACTCGTggataaatcaaaatcaaatgtatttatatagcccttcgtactgctgtacagaatcccagcctgaaaccccaaacagcaagcaatgcaggtgttgaagcacggtggctaggaaaaactccatagaaaggccaaaacctagagaggaaccaggctatgtggggtgggccagtcctcttctggctgtgccgggtggagattataacaggacatggccaagatgttcaaatgttcataaatgaccagcatggtcaaataataggtctgggacaggtagcacgtccggtgaacaggtcagggttccatagccgcaggcagaacagttgaaactggagcagcagcatatTTATATCATATTTATctttctgtgtccagtatgaaggaaagttagaggtagtttcgtgaCCCAAAGCTAACTAGCTTTAGAGCAATGACTGCTAGCAGATACTAGTAGACTTCCAGTCGTTGCGATAACGctaaaatcctgaagtatccctttaaggatTCTGTGCGCTACAAAAGCTGTTGTGttgcaacaataa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2279746 True 715 lncRNA 0.43 1 5699156 5699870

Neighbor

gene id symbol gene type direction distance location
usp8 LOC106592072 coding downstream 1897 5662576 ~ 5697259 (-)
LOC118944412 LOC100135822 coding downstream 397506 5249279 ~ 5301650 (-)
LOC110515681 agrp1 coding downstream 551846 5143731 ~ 5147310 (-)
LOC110515683 LOC105025469 coding downstream 612716 5043780 ~ 5086440 (-)
LOC110525056 LOC106592677 coding downstream 723866 4973789 ~ 4975290 (-)
LOC110514656 LOC106593544 coding upstream 49656 5749526 ~ 5761005 (-)
LOC110514841 LOC106593544 coding upstream 77152 5777022 ~ 5793342 (-)
LOC110519162 s27a2 coding upstream 95218 5795088 ~ 5816747 (-)
LOC110517106 fsd2 coding upstream 349484 6049354 ~ 6099236 (-)
LOC118944399 LOC106562864 coding upstream 445678 6145548 ~ 6298226 (-)
G1992346 NA non-coding downstream 11600 5631853 ~ 5687556 (-)
G1992329 NA non-coding downstream 37228 5660547 ~ 5661928 (-)
G1992330 NA non-coding downstream 40744 5657584 ~ 5658412 (-)
G1992351 NA non-coding downstream 47964 5635723 ~ 5651192 (-)
G1992345 NA non-coding downstream 71389 5627077 ~ 5627767 (-)
G1992374 NA non-coding upstream 7898 5707768 ~ 5708019 (-)
G1992376 NA non-coding upstream 9333 5709203 ~ 5709665 (-)
G1992379 NA non-coding upstream 15769 5715639 ~ 5715992 (-)
G1992380 NA non-coding upstream 17598 5717468 ~ 5717687 (-)
G1992381 NA non-coding upstream 19334 5719204 ~ 5719831 (-)
G1991846 NA other downstream 439374 5257722 ~ 5259782 (-)
LOC110526851 vps13c other downstream 845401 4718652 ~ 4972108 (-)
G1991436 NA other downstream 1111286 4586727 ~ 4587870 (-)
G1991382 NA other downstream 1224892 4473753 ~ 4474264 (-)
G1992375 NA other upstream 8398 5708268 ~ 5708684 (-)
G1992485 NA other upstream 286561 5986431 ~ 5988773 (-)
LOC118936596 LOC106591161 other upstream 697174 6391414 ~ 6444276 (-)
G1994075 NA other upstream 1689375 7389245 ~ 7389568 (-)
LOC118936603 LOC106587968 other upstream 1951516 7647283 ~ 7665132 (-)

Expression


Co-expression Network