Gene
RNA
| Item | Value |
|---|---|
| gene id | G1992374 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 5707768 ~ 5708019 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| zinc finger BED domain-containing protein 5-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2279752 | True | 252 | lncRNA | 0.44 | 1 | 5707768 | 5708019 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| usp8 | LOC106592072 | coding | downstream | 10509 | 5662576 ~ 5697259 (-) |
| LOC118944412 | LOC100135822 | coding | downstream | 406118 | 5249279 ~ 5301650 (-) |
| LOC110515681 | agrp1 | coding | downstream | 560458 | 5143731 ~ 5147310 (-) |
| LOC110515683 | LOC105025469 | coding | downstream | 621328 | 5043780 ~ 5086440 (-) |
| LOC110525056 | LOC106592677 | coding | downstream | 732478 | 4973789 ~ 4975290 (-) |
| LOC110514656 | LOC106593544 | coding | upstream | 41507 | 5749526 ~ 5761005 (-) |
| LOC110514841 | LOC106593544 | coding | upstream | 69003 | 5777022 ~ 5793342 (-) |
| LOC110519162 | s27a2 | coding | upstream | 87069 | 5795088 ~ 5816747 (-) |
| LOC110517106 | fsd2 | coding | upstream | 341335 | 6049354 ~ 6099236 (-) |
| LOC118944399 | LOC106562864 | coding | upstream | 437529 | 6145548 ~ 6298226 (-) |
| G1992370 | NA | non-coding | downstream | 7898 | 5699156 ~ 5699870 (-) |
| G1992346 | NA | non-coding | downstream | 20212 | 5631853 ~ 5687556 (-) |
| G1992329 | NA | non-coding | downstream | 45840 | 5660547 ~ 5661928 (-) |
| G1992330 | NA | non-coding | downstream | 49356 | 5657584 ~ 5658412 (-) |
| G1992351 | NA | non-coding | downstream | 56576 | 5635723 ~ 5651192 (-) |
| G1992376 | NA | non-coding | upstream | 1184 | 5709203 ~ 5709665 (-) |
| G1992379 | NA | non-coding | upstream | 7620 | 5715639 ~ 5715992 (-) |
| G1992380 | NA | non-coding | upstream | 9449 | 5717468 ~ 5717687 (-) |
| G1992381 | NA | non-coding | upstream | 11185 | 5719204 ~ 5719831 (-) |
| G1992385 | NA | non-coding | upstream | 17907 | 5725926 ~ 5726156 (-) |
| G1991846 | NA | other | downstream | 447986 | 5257722 ~ 5259782 (-) |
| LOC110526851 | vps13c | other | downstream | 854013 | 4718652 ~ 4972108 (-) |
| G1991436 | NA | other | downstream | 1119898 | 4586727 ~ 4587870 (-) |
| G1991382 | NA | other | downstream | 1233504 | 4473753 ~ 4474264 (-) |
| G1992375 | NA | other | upstream | 249 | 5708268 ~ 5708684 (-) |
| G1992485 | NA | other | upstream | 278412 | 5986431 ~ 5988773 (-) |
| LOC118936596 | LOC106591161 | other | upstream | 689025 | 6391414 ~ 6444276 (-) |
| G1994075 | NA | other | upstream | 1681226 | 7389245 ~ 7389568 (-) |
| LOC118936603 | LOC106587968 | other | upstream | 1943367 | 7647283 ~ 7665132 (-) |
