Gene
RNA
| Item | Value |
|---|---|
| gene id | G1992380 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 5717468 ~ 5717687 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2279760 | True | 220 | lncRNA | 0.37 | 1 | 5717468 | 5717687 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| usp8 | LOC106592072 | coding | downstream | 20209 | 5662576 ~ 5697259 (-) |
| LOC118944412 | LOC100135822 | coding | downstream | 415818 | 5249279 ~ 5301650 (-) |
| LOC110515681 | agrp1 | coding | downstream | 570158 | 5143731 ~ 5147310 (-) |
| LOC110515683 | LOC105025469 | coding | downstream | 631028 | 5043780 ~ 5086440 (-) |
| LOC110525056 | LOC106592677 | coding | downstream | 742178 | 4973789 ~ 4975290 (-) |
| LOC110514656 | LOC106593544 | coding | upstream | 31839 | 5749526 ~ 5761005 (-) |
| LOC110514841 | LOC106593544 | coding | upstream | 59335 | 5777022 ~ 5793342 (-) |
| LOC110519162 | s27a2 | coding | upstream | 77401 | 5795088 ~ 5816747 (-) |
| LOC110517106 | fsd2 | coding | upstream | 331667 | 6049354 ~ 6099236 (-) |
| LOC118944399 | LOC106562864 | coding | upstream | 427861 | 6145548 ~ 6298226 (-) |
| G1992379 | NA | non-coding | downstream | 1476 | 5715639 ~ 5715992 (-) |
| G1992376 | NA | non-coding | downstream | 7803 | 5709203 ~ 5709665 (-) |
| G1992374 | NA | non-coding | downstream | 9449 | 5707768 ~ 5708019 (-) |
| G1992370 | NA | non-coding | downstream | 17598 | 5699156 ~ 5699870 (-) |
| G1992329 | NA | non-coding | downstream | 55540 | 5660547 ~ 5661928 (-) |
| G1992381 | NA | non-coding | upstream | 1517 | 5719204 ~ 5719831 (-) |
| G1992385 | NA | non-coding | upstream | 8239 | 5725926 ~ 5726156 (-) |
| G1992388 | NA | non-coding | upstream | 14737 | 5732424 ~ 5740659 (-) |
| G1992360 | NA | non-coding | upstream | 26466 | 5744153 ~ 5745642 (-) |
| G1992389 | NA | non-coding | upstream | 28074 | 5745761 ~ 5746311 (-) |
| G1992375 | NA | other | downstream | 8784 | 5708268 ~ 5708684 (-) |
| G1991846 | NA | other | downstream | 457686 | 5257722 ~ 5259782 (-) |
| LOC110526851 | vps13c | other | downstream | 863713 | 4718652 ~ 4972108 (-) |
| G1991436 | NA | other | downstream | 1129598 | 4586727 ~ 4587870 (-) |
| G1992485 | NA | other | upstream | 268744 | 5986431 ~ 5988773 (-) |
| LOC118936596 | LOC106591161 | other | upstream | 679357 | 6391414 ~ 6444276 (-) |
| G1994075 | NA | other | upstream | 1671558 | 7389245 ~ 7389568 (-) |
| LOC118936603 | LOC106587968 | other | upstream | 1933699 | 7647283 ~ 7665132 (-) |
| LOC110526845 | LOC106592787 | other | upstream | 2031608 | 7744309 ~ 7751407 (-) |
