Gene
RNA
| Item | Value |
|---|---|
| gene id | G1992385 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 5725926 ~ 5726156 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC109905982, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2279765 | True | 231 | lncRNA | 0.54 | 1 | 5725926 | 5726156 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| usp8 | LOC106592072 | coding | downstream | 28667 | 5662576 ~ 5697259 (-) |
| LOC118944412 | LOC100135822 | coding | downstream | 424276 | 5249279 ~ 5301650 (-) |
| LOC110515681 | agrp1 | coding | downstream | 578616 | 5143731 ~ 5147310 (-) |
| LOC110515683 | LOC105025469 | coding | downstream | 639486 | 5043780 ~ 5086440 (-) |
| LOC110525056 | LOC106592677 | coding | downstream | 750636 | 4973789 ~ 4975290 (-) |
| LOC110514656 | LOC106593544 | coding | upstream | 23370 | 5749526 ~ 5761005 (-) |
| LOC110514841 | LOC106593544 | coding | upstream | 50866 | 5777022 ~ 5793342 (-) |
| LOC110519162 | s27a2 | coding | upstream | 68932 | 5795088 ~ 5816747 (-) |
| LOC110517106 | fsd2 | coding | upstream | 323198 | 6049354 ~ 6099236 (-) |
| LOC118944399 | LOC106562864 | coding | upstream | 419392 | 6145548 ~ 6298226 (-) |
| G1992381 | NA | non-coding | downstream | 6095 | 5719204 ~ 5719831 (-) |
| G1992380 | NA | non-coding | downstream | 8239 | 5717468 ~ 5717687 (-) |
| G1992379 | NA | non-coding | downstream | 9934 | 5715639 ~ 5715992 (-) |
| G1992376 | NA | non-coding | downstream | 16261 | 5709203 ~ 5709665 (-) |
| G1992374 | NA | non-coding | downstream | 17907 | 5707768 ~ 5708019 (-) |
| G1992388 | NA | non-coding | upstream | 6268 | 5732424 ~ 5740659 (-) |
| G1992360 | NA | non-coding | upstream | 17997 | 5744153 ~ 5745642 (-) |
| G1992389 | NA | non-coding | upstream | 19605 | 5745761 ~ 5746311 (-) |
| G1992358 | NA | non-coding | upstream | 61229 | 5787385 ~ 5788324 (-) |
| G1992400 | NA | non-coding | upstream | 65841 | 5791997 ~ 5792667 (-) |
| G1992375 | NA | other | downstream | 17242 | 5708268 ~ 5708684 (-) |
| G1991846 | NA | other | downstream | 466144 | 5257722 ~ 5259782 (-) |
| LOC110526851 | vps13c | other | downstream | 872171 | 4718652 ~ 4972108 (-) |
| G1991436 | NA | other | downstream | 1138056 | 4586727 ~ 4587870 (-) |
| G1992485 | NA | other | upstream | 260275 | 5986431 ~ 5988773 (-) |
| LOC118936596 | LOC106591161 | other | upstream | 670888 | 6391414 ~ 6444276 (-) |
| G1994075 | NA | other | upstream | 1663089 | 7389245 ~ 7389568 (-) |
| LOC118936603 | LOC106587968 | other | upstream | 1925230 | 7647283 ~ 7665132 (-) |
| LOC110526845 | LOC106592787 | other | upstream | 2023139 | 7744309 ~ 7751407 (-) |
