Gene
RNA
| Item | Value |
|---|---|
| gene id | G1992400 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 5791997 ~ 5792667 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2279799 | True | 515 | lncRNA | 0.50 | 2 | 5791997 | 5792667 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110514656 | LOC106593544 | coding | downstream | 30992 | 5749526 ~ 5761005 (-) |
| usp8 | LOC106592072 | coding | downstream | 94738 | 5662576 ~ 5697259 (-) |
| LOC118944412 | LOC100135822 | coding | downstream | 490347 | 5249279 ~ 5301650 (-) |
| LOC110515681 | agrp1 | coding | downstream | 644687 | 5143731 ~ 5147310 (-) |
| LOC110515683 | LOC105025469 | coding | downstream | 705557 | 5043780 ~ 5086440 (-) |
| LOC110519162 | s27a2 | coding | upstream | 2421 | 5795088 ~ 5816747 (-) |
| LOC110517106 | fsd2 | coding | upstream | 256687 | 6049354 ~ 6099236 (-) |
| LOC118944399 | LOC106562864 | coding | upstream | 352881 | 6145548 ~ 6298226 (-) |
| LOC118944448 | LOC106562861 | coding | upstream | 552622 | 6345289 ~ 6352326 (-) |
| LOC118936596 | LOC106591161 | coding | upstream | 598747 | 6391414 ~ 6444276 (-) |
| G1992358 | NA | non-coding | downstream | 3673 | 5787385 ~ 5788324 (-) |
| G1992389 | NA | non-coding | downstream | 45686 | 5745761 ~ 5746311 (-) |
| G1992360 | NA | non-coding | downstream | 46355 | 5744153 ~ 5745642 (-) |
| G1992388 | NA | non-coding | downstream | 51338 | 5732424 ~ 5740659 (-) |
| G1992385 | NA | non-coding | downstream | 65841 | 5725926 ~ 5726156 (-) |
| G1992424 | NA | non-coding | upstream | 57882 | 5850549 ~ 5851406 (-) |
| G1992437 | NA | non-coding | upstream | 75590 | 5868257 ~ 5868949 (-) |
| G1992438 | NA | non-coding | upstream | 78254 | 5870921 ~ 5872098 (-) |
| G1992447 | NA | non-coding | upstream | 97172 | 5889839 ~ 5891360 (-) |
| G1992375 | NA | other | downstream | 83313 | 5708268 ~ 5708684 (-) |
| G1991846 | NA | other | downstream | 532215 | 5257722 ~ 5259782 (-) |
| LOC110526851 | vps13c | other | downstream | 938242 | 4718652 ~ 4972108 (-) |
| G1991436 | NA | other | downstream | 1204127 | 4586727 ~ 4587870 (-) |
| G1992485 | NA | other | upstream | 193764 | 5986431 ~ 5988773 (-) |
| G1994075 | NA | other | upstream | 1596578 | 7389245 ~ 7389568 (-) |
| LOC118936603 | LOC106587968 | other | upstream | 1858719 | 7647283 ~ 7665132 (-) |
| LOC110526845 | LOC106592787 | other | upstream | 1956628 | 7744309 ~ 7751407 (-) |
