Gene
RNA
| Item | Value |
|---|---|
| gene id | G1992478 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 5972702 ~ 5973169 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2279903 | True | 232 | lncRNA | 0.46 | 2 | 5972702 | 5973169 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110519162 | s27a2 | coding | downstream | 155955 | 5795088 ~ 5816747 (-) |
| LOC110514841 | LOC106593544 | coding | downstream | 179360 | 5777022 ~ 5793342 (-) |
| LOC110514656 | LOC106593544 | coding | downstream | 211697 | 5749526 ~ 5761005 (-) |
| usp8 | LOC106592072 | coding | downstream | 275443 | 5662576 ~ 5697259 (-) |
| LOC118944412 | LOC100135822 | coding | downstream | 671052 | 5249279 ~ 5301650 (-) |
| LOC110517106 | fsd2 | coding | upstream | 76185 | 6049354 ~ 6099236 (-) |
| LOC118944399 | LOC106562864 | coding | upstream | 172379 | 6145548 ~ 6298226 (-) |
| LOC118944448 | LOC106562861 | coding | upstream | 372120 | 6345289 ~ 6352326 (-) |
| LOC118936596 | LOC106591161 | coding | upstream | 418245 | 6391414 ~ 6444276 (-) |
| LOC118944398 | NA | coding | upstream | 420914 | 6394083 ~ 6397020 (-) |
| G1992456 | NA | non-coding | downstream | 47810 | 5924651 ~ 5924892 (-) |
| G1992455 | NA | non-coding | downstream | 49628 | 5922601 ~ 5923074 (-) |
| G1992452 | NA | non-coding | downstream | 55214 | 5916867 ~ 5917488 (-) |
| G1992449 | NA | non-coding | downstream | 73100 | 5899332 ~ 5899602 (-) |
| G1992447 | NA | non-coding | downstream | 81342 | 5889839 ~ 5891360 (-) |
| G1992492 | NA | non-coding | upstream | 21523 | 5994692 ~ 5996542 (-) |
| G1992464 | NA | non-coding | upstream | 37278 | 6010447 ~ 6015338 (-) |
| G1992493 | NA | non-coding | upstream | 52160 | 6025329 ~ 6026898 (-) |
| G1992509 | NA | non-coding | upstream | 53877 | 6027046 ~ 6027478 (-) |
| G1992517 | NA | non-coding | upstream | 60886 | 6034055 ~ 6034660 (-) |
| G1992375 | NA | other | downstream | 264018 | 5708268 ~ 5708684 (-) |
| G1991846 | NA | other | downstream | 712920 | 5257722 ~ 5259782 (-) |
| LOC110515683 | LOC105025469 | other | downstream | 887016 | 5043780 ~ 5086440 (-) |
| LOC110526851 | vps13c | other | downstream | 1118947 | 4718652 ~ 4972108 (-) |
| G1991436 | NA | other | downstream | 1384832 | 4586727 ~ 4587870 (-) |
| G1992485 | NA | other | upstream | 13262 | 5986431 ~ 5988773 (-) |
| G1994075 | NA | other | upstream | 1416076 | 7389245 ~ 7389568 (-) |
| LOC118936603 | LOC106587968 | other | upstream | 1678217 | 7647283 ~ 7665132 (-) |
| LOC110526845 | LOC106592787 | other | upstream | 1776126 | 7744309 ~ 7751407 (-) |
