G1992493


Basic Information

Item Value
gene id G1992493
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 6025329 ~ 6026898 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2279921
ttccCCTCGGTGCCTTCAGACCAGAAGTAGTAGCCAATCAGAAGGAACAAACTCATTCCCTGATGTGAGTGTTTAATTCAACCTGAAAGAGTTATCAAGTTACTCATCGATCACTAATAgcaaaacacatcatcatcaaCCGACGTTTATGTGTTAaggtattttatatatatatatactgtttaaATAGGAAATCATCTTAATAAGCAACATTGTTTAACATATATTAGTATCCTCATCTGAAAGCACCCTTGGGCAGAGCACCCTGGGTAAAGTGACCCCTTGTCTGCGTGTCACAAAGGATCTTGAACAAATGGCCAATAATGGGGAGGACGTTGGTCAACATCAAGTCAAAGCAAGCTGGTTTCtaggagacagagggggaaaaGACAGTGATAGACAATTCTGTGATCCACATCCTTAATTAATCATTATAATCATATAGAgcgtgtcccaaatgacaccctattccctatatagtgcactactttagaccagggctggcaccctattccctacatagtgcactactttagaccagggctggcaccctattccctacatagtgcactactttagaccagggctggcaccctattccctacatagtgcactactttagaccagggctggcaccctattccctacatagtgcactactttagaccagggctggcaccctattccctacatagtgcactactttagaccagggctggcaccctactCCCAGAgatgcaccatatagggaatagagtgcaatttAGGACACGGACAGAGTTTCTCTGTTTACAGGACTGAAATGTTTCTCGACCAACCCAACAAAACATTTTACAGCAGGTGAACCCAGATAGTTAATAAGTTGTTATTCCTGTCACTCCAGTGTAAAATTCAGAGTCTATAAAAATATTGACATTTACTTGAACATACATTTGTTTTCTGACTGTGTTATTAAAAAACGTCCATATGTCCATATCCACTGCACAGTgggatgtactgtagctgggacaatgtagctgggacaatgtactgtagctgggacgatgtactgtagctgggacgatgtactgtagctgggacaatgtactgtagctgggacgatgtactgtagctgggacgatgtactgtagctgggacgatgtactgtagctggggcgatgtactgtagctgggacaatgtactgtagctgggacgatgtactgtagctgggacgatgtactgtagctgggacgatgtactgtagctgggacgatgtactgtagctgggacgatgtactgtggctgggacgatgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2279921 True 1294 lncRNA 0.44 3 6025329 6026898

Neighbor

gene id symbol gene type direction distance location
LOC110519162 s27a2 coding downstream 208582 5795088 ~ 5816747 (-)
LOC110514841 LOC106593544 coding downstream 231987 5777022 ~ 5793342 (-)
LOC110514656 LOC106593544 coding downstream 264324 5749526 ~ 5761005 (-)
usp8 LOC106592072 coding downstream 328070 5662576 ~ 5697259 (-)
LOC118944412 LOC100135822 coding downstream 723679 5249279 ~ 5301650 (-)
LOC110517106 fsd2 coding upstream 22456 6049354 ~ 6099236 (-)
LOC118944399 LOC106562864 coding upstream 118650 6145548 ~ 6298226 (-)
LOC118944448 LOC106562861 coding upstream 318391 6345289 ~ 6352326 (-)
LOC118936596 LOC106591161 coding upstream 364516 6391414 ~ 6444276 (-)
LOC118944398 NA coding upstream 367185 6394083 ~ 6397020 (-)
G1992464 NA non-coding downstream 9991 6010447 ~ 6015338 (-)
G1992465 NA non-coding downstream 18240 5950473 ~ 6007089 (-)
G1992492 NA non-coding downstream 28787 5994692 ~ 5996542 (-)
G1992478 NA non-coding downstream 52160 5972702 ~ 5973169 (-)
G1992456 NA non-coding downstream 100437 5924651 ~ 5924892 (-)
G1992509 NA non-coding upstream 148 6027046 ~ 6027478 (-)
G1992517 NA non-coding upstream 7157 6034055 ~ 6034660 (-)
G1992489 LOC106562797 non-coding upstream 12744 6039642 ~ 6040592 (-)
G1992486 NA non-coding upstream 17556 6044454 ~ 6045820 (-)
G1992548 NA non-coding upstream 86390 6113288 ~ 6114617 (-)
G1992485 NA other downstream 36556 5986431 ~ 5988773 (-)
G1992375 NA other downstream 316645 5708268 ~ 5708684 (-)
G1991846 NA other downstream 765547 5257722 ~ 5259782 (-)
LOC110515683 LOC105025469 other downstream 939643 5043780 ~ 5086440 (-)
LOC110526851 vps13c other downstream 1171574 4718652 ~ 4972108 (-)
G1994075 NA other upstream 1362347 7389245 ~ 7389568 (-)
LOC118936603 LOC106587968 other upstream 1624488 7647283 ~ 7665132 (-)
LOC110526845 LOC106592787 other upstream 1722397 7744309 ~ 7751407 (-)
LOC118944558 LOC106595801 other upstream 1776946 7802643 ~ 7809933 (-)

Expression


Co-expression Network