Gene
RNA
| Item | Value |
|---|---|
| gene id | G1992509 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 6027046 ~ 6027478 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2279937 | True | 433 | lncRNA | 0.41 | 1 | 6027046 | 6027478 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110519162 | s27a2 | coding | downstream | 210299 | 5795088 ~ 5816747 (-) |
| LOC110514841 | LOC106593544 | coding | downstream | 233704 | 5777022 ~ 5793342 (-) |
| LOC110514656 | LOC106593544 | coding | downstream | 266041 | 5749526 ~ 5761005 (-) |
| usp8 | LOC106592072 | coding | downstream | 329787 | 5662576 ~ 5697259 (-) |
| LOC118944412 | LOC100135822 | coding | downstream | 725396 | 5249279 ~ 5301650 (-) |
| LOC110517106 | fsd2 | coding | upstream | 21876 | 6049354 ~ 6099236 (-) |
| LOC118944399 | LOC106562864 | coding | upstream | 118070 | 6145548 ~ 6298226 (-) |
| LOC118944448 | LOC106562861 | coding | upstream | 317811 | 6345289 ~ 6352326 (-) |
| LOC118936596 | LOC106591161 | coding | upstream | 363936 | 6391414 ~ 6444276 (-) |
| LOC118944398 | NA | coding | upstream | 366605 | 6394083 ~ 6397020 (-) |
| G1992493 | NA | non-coding | downstream | 148 | 6025329 ~ 6026898 (-) |
| G1992464 | NA | non-coding | downstream | 11708 | 6010447 ~ 6015338 (-) |
| G1992465 | NA | non-coding | downstream | 19957 | 5950473 ~ 6007089 (-) |
| G1992492 | NA | non-coding | downstream | 30504 | 5994692 ~ 5996542 (-) |
| G1992478 | NA | non-coding | downstream | 53877 | 5972702 ~ 5973169 (-) |
| G1992517 | NA | non-coding | upstream | 6577 | 6034055 ~ 6034660 (-) |
| G1992489 | LOC106562797 | non-coding | upstream | 12164 | 6039642 ~ 6040592 (-) |
| G1992486 | NA | non-coding | upstream | 16976 | 6044454 ~ 6045820 (-) |
| G1992548 | NA | non-coding | upstream | 85810 | 6113288 ~ 6114617 (-) |
| G1992550 | NA | non-coding | upstream | 90274 | 6117752 ~ 6118148 (-) |
| G1992485 | NA | other | downstream | 38273 | 5986431 ~ 5988773 (-) |
| G1992375 | NA | other | downstream | 318362 | 5708268 ~ 5708684 (-) |
| G1991846 | NA | other | downstream | 767264 | 5257722 ~ 5259782 (-) |
| LOC110515683 | LOC105025469 | other | downstream | 941360 | 5043780 ~ 5086440 (-) |
| LOC110526851 | vps13c | other | downstream | 1173291 | 4718652 ~ 4972108 (-) |
| G1994075 | NA | other | upstream | 1361767 | 7389245 ~ 7389568 (-) |
| LOC118936603 | LOC106587968 | other | upstream | 1623908 | 7647283 ~ 7665132 (-) |
| LOC110526845 | LOC106592787 | other | upstream | 1721817 | 7744309 ~ 7751407 (-) |
| LOC118944558 | LOC106595801 | other | upstream | 1776366 | 7802643 ~ 7809933 (-) |
