Gene
RNA
| Item | Value |
|---|---|
| gene id | G1992557 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 6139509 ~ 6139763 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2279998 | True | 255 | lncRNA | 0.53 | 1 | 6139509 | 6139763 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110517106 | fsd2 | coding | downstream | 40273 | 6049354 ~ 6099236 (-) |
| LOC110519162 | s27a2 | coding | downstream | 322762 | 5795088 ~ 5816747 (-) |
| LOC110514841 | LOC106593544 | coding | downstream | 346167 | 5777022 ~ 5793342 (-) |
| LOC110514656 | LOC106593544 | coding | downstream | 378504 | 5749526 ~ 5761005 (-) |
| usp8 | LOC106592072 | coding | downstream | 442250 | 5662576 ~ 5697259 (-) |
| LOC118944399 | LOC106562864 | coding | upstream | 5785 | 6145548 ~ 6298226 (-) |
| LOC118944448 | LOC106562861 | coding | upstream | 205526 | 6345289 ~ 6352326 (-) |
| LOC118936596 | LOC106591161 | coding | upstream | 251651 | 6391414 ~ 6444276 (-) |
| LOC118944398 | NA | coding | upstream | 254320 | 6394083 ~ 6397020 (-) |
| LOC110516490 | LOC106588008 | coding | upstream | 684301 | 6824064 ~ 6830995 (-) |
| G1992555 | NA | non-coding | downstream | 3591 | 6135637 ~ 6135918 (-) |
| G1992554 | NA | non-coding | downstream | 5503 | 6133177 ~ 6134006 (-) |
| G1992553 | NA | non-coding | downstream | 8335 | 6130680 ~ 6131174 (-) |
| G1992541 | NA | non-coding | downstream | 11460 | 6126862 ~ 6128049 (-) |
| G1992552 | NA | non-coding | downstream | 12944 | 6125912 ~ 6126565 (-) |
| G1992558 | NA | non-coding | upstream | 1243 | 6141006 ~ 6141555 (-) |
| G1992528 | NA | non-coding | upstream | 3639 | 6143402 ~ 6144880 (-) |
| G1992571 | NA | non-coding | upstream | 54270 | 6194033 ~ 6203665 (-) |
| G1992579 | NA | non-coding | upstream | 100941 | 6240704 ~ 6242551 (-) |
| G1992485 | NA | other | downstream | 150736 | 5986431 ~ 5988773 (-) |
| G1992375 | NA | other | downstream | 430825 | 5708268 ~ 5708684 (-) |
| G1991846 | NA | other | downstream | 879727 | 5257722 ~ 5259782 (-) |
| LOC110515683 | LOC105025469 | other | downstream | 1053823 | 5043780 ~ 5086440 (-) |
| LOC110526851 | vps13c | other | downstream | 1285754 | 4718652 ~ 4972108 (-) |
| G1994075 | NA | other | upstream | 1249482 | 7389245 ~ 7389568 (-) |
| LOC118936603 | LOC106587968 | other | upstream | 1511623 | 7647283 ~ 7665132 (-) |
| LOC110526845 | LOC106592787 | other | upstream | 1609532 | 7744309 ~ 7751407 (-) |
| LOC118944558 | LOC106595801 | other | upstream | 1664081 | 7802643 ~ 7809933 (-) |
