G1993224


Basic Information

Item Value
gene id G1993224
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 7236325 ~ 7236867 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2280889
agtcttctctaggggttgtcttgtagagactataatggtgtgtatcagtcttctctatgggttgtcttgtagagactataatggtgtgtatcagtcttctctatgggttgtcttgtagagactataatggtgtgtatcagtcttctctaggggttgtcttgtagagactataatggtgtgtatcagtcttctctatgggttgtcttgtagagactataatggtgtgtatcagtcttctctatgggttgtcttgtagagactataatggtgtgtatcagtcttctctatgggttgtcttgtagagactataatggtgtgtatcagtcttctctatgggttgtcttgtagagactataatggtgtgtatcagtcttctctatgggttgtcttgtagagactataatggtgtgtatcagtcttctctaggggttgtcttgtagagactataatggtgtgtatcagtcttctctatgggttgtcttgtagagactataatggtgtgtatcagtgggttgtcttgtagagactataatggtgtgtatc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2280889 True 543 lncRNA 0.40 1 7236325 7236867

Neighbor

gene id symbol gene type direction distance location
LOC110527022 LOC106587927 coding downstream 56646 7175082 ~ 7179679 (-)
LOC110507001 LOC106587953 coding downstream 149374 7068612 ~ 7086951 (-)
LOC110506999 LOC105026498 coding downstream 174774 7048931 ~ 7061551 (-)
LOC118944479 NA coding downstream 187856 7047760 ~ 7048469 (-)
LOC110527018 LOC106587942 coding downstream 196587 7002295 ~ 7039738 (-)
LOC110526832 LOC106587935 coding upstream 169290 7406157 ~ 7439603 (-)
LOC118944524 LOC106562850 coding upstream 218354 7455221 ~ 7528244 (-)
LOC118944525 NA coding upstream 228253 7465120 ~ 7466620 (-)
LOC110526835 LOC105026486 coding upstream 321144 7558011 ~ 7564844 (-)
LOC110526838 LOC106587956 coding upstream 329749 7566616 ~ 7572156 (-)
G1993220 NA non-coding downstream 7971 7228133 ~ 7228354 (-)
G1993205 LOC100194703 non-coding downstream 21450 7214492 ~ 7214875 (-)
G1993201 NA non-coding downstream 23838 7212267 ~ 7212487 (-)
G1993196 NA non-coding downstream 29995 7206120 ~ 7206330 (-)
G1993174 NA non-coding downstream 42141 7193065 ~ 7194184 (-)
G1993247 NA non-coding upstream 37802 7274669 ~ 7275542 (-)
G1993277 NA non-coding upstream 73232 7310099 ~ 7311680 (-)
G1994056 NA non-coding upstream 103409 7340276 ~ 7341661 (-)
G1994059 NA non-coding upstream 116292 7353159 ~ 7354487 (-)
G1994065 NA non-coding upstream 128753 7365620 ~ 7365838 (-)
LOC118936596 LOC106591161 other downstream 792096 6391414 ~ 6444276 (-)
G1992485 NA other downstream 1247552 5986431 ~ 5988773 (-)
G1992375 NA other downstream 1527641 5708268 ~ 5708684 (-)
G1991846 NA other downstream 1976543 5257722 ~ 5259782 (-)
LOC110515683 LOC105025469 other downstream 2150639 5043780 ~ 5086440 (-)
G1994075 NA other upstream 152378 7389245 ~ 7389568 (-)
LOC118936603 LOC106587968 other upstream 414519 7647283 ~ 7665132 (-)
LOC110526845 LOC106592787 other upstream 512428 7744309 ~ 7751407 (-)
LOC118944558 LOC106595801 other upstream 566977 7802643 ~ 7809933 (-)
LOC110515105 LOC106593850 other upstream 634315 7863456 ~ 7873075 (-)

Expression


Co-expression Network