G1993277


Basic Information

Item Value
gene id G1993277
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 7310099 ~ 7311680 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2280951
GACTGACATTAAAACATTATActgtgagtgtgttgactgacattaaaacattatactgtgagtgtgttgactgacatggaaacattatactgtgagtgtgttgactgacatggaaacattaaactgtgagtgtgttgactgacattaaaacattatactgtgagtgtgttgactgacatGGAAACACTATActgtgagtgtgttgactgacattaaaacattatactgtgagtgtgttgactgacattaaaacattatactgtgagtgtgttgactgacatggaaacattatactgtgagtgtgttgactgacatggaaacattaaactgtgagtgtgttgactgacattaaaacattatactgtgagtgtgttgactgacattaaaacattatactgtgagtgtgttgactgacatggaaacattatactgtgagtgtgttgactgacattaaaacattatactgtgagtgtgttgactgacatggaaacattaaactgtgagtgtgttgactgacatggaaacattatactgtgagtgtgttgactgacattaaaacattatactgtgagtgtgttgactgacatggaaacattaaactgtgagtgtgttgactgacatgaaaacattatactgtgagtgtgttgactgacatgaaaacattatactgtgagtgtgttgactgacatGAAAACATTATACtgtgagtgtgttgactgacatgaaaacattatactgtgagtgtgttgactgacatggaaacattatactgtgagtgtgttgactgacagggaaacattatactgtgagtgtgttgactgacattaaaacattatactgtgagtgtgttgactgacattaaaacattatactgtgtgtgttgactgacattaaaacattatactgtgagtgtgttgactgacattaaaacattatactgtgtgtgttgactgacatggaaacattaaactgtgagtgtgttgactgacattaaaacattatac

Function

NR:

description
gastrula zinc finger protein XlCGF8.2DB-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2280951 True 1004 lncRNA 0.35 2 7310099 7311680

Neighbor

gene id symbol gene type direction distance location
LOC110527022 LOC106587927 coding downstream 130420 7175082 ~ 7179679 (-)
LOC110507001 LOC106587953 coding downstream 223148 7068612 ~ 7086951 (-)
LOC110506999 LOC105026498 coding downstream 248548 7048931 ~ 7061551 (-)
LOC118944479 NA coding downstream 261630 7047760 ~ 7048469 (-)
LOC110527018 LOC106587942 coding downstream 270361 7002295 ~ 7039738 (-)
LOC110526832 LOC106587935 coding upstream 94477 7406157 ~ 7439603 (-)
LOC118944524 LOC106562850 coding upstream 143541 7455221 ~ 7528244 (-)
LOC118944525 NA coding upstream 153440 7465120 ~ 7466620 (-)
LOC110526835 LOC105026486 coding upstream 246331 7558011 ~ 7564844 (-)
LOC110526838 LOC106587956 coding upstream 254936 7566616 ~ 7572156 (-)
G1993247 NA non-coding downstream 34557 7274669 ~ 7275542 (-)
G1993224 NA non-coding downstream 73232 7236325 ~ 7236867 (-)
G1993220 NA non-coding downstream 81745 7228133 ~ 7228354 (-)
G1993205 LOC100194703 non-coding downstream 95224 7214492 ~ 7214875 (-)
G1993201 NA non-coding downstream 97612 7212267 ~ 7212487 (-)
G1994056 NA non-coding upstream 28596 7340276 ~ 7341661 (-)
G1994059 NA non-coding upstream 41479 7353159 ~ 7354487 (-)
G1994065 NA non-coding upstream 53940 7365620 ~ 7365838 (-)
G1994077 NA non-coding upstream 78506 7390186 ~ 7390403 (-)
G1994082 NA non-coding upstream 88556 7400236 ~ 7400720 (-)
LOC118936596 LOC106591161 other downstream 865870 6391414 ~ 6444276 (-)
G1992485 NA other downstream 1321326 5986431 ~ 5988773 (-)
G1992375 NA other downstream 1601415 5708268 ~ 5708684 (-)
G1991846 NA other downstream 2050317 5257722 ~ 5259782 (-)
LOC110515683 LOC105025469 other downstream 2224413 5043780 ~ 5086440 (-)
G1994075 NA other upstream 77565 7389245 ~ 7389568 (-)
LOC118936603 LOC106587968 other upstream 339706 7647283 ~ 7665132 (-)
LOC110526845 LOC106592787 other upstream 437615 7744309 ~ 7751407 (-)
LOC118944558 LOC106595801 other upstream 492164 7802643 ~ 7809933 (-)
LOC110515105 LOC106593850 other upstream 559502 7863456 ~ 7873075 (-)

Expression


Co-expression Network