G1994098


Basic Information

Item Value
gene id G1994098
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 7446801 ~ 7453901 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2282122
tcacatgtgctcagtgtgaacctgctttcatctgtgaaccAATTCGGATGATATTGTTGATTactgctgttttttttaaactctttTCTCTCTtgtaactagctgattcatctagactacattagagatgatcagattatatatctaactagctgattcatctagactacattagaggtgatcagatggtatatctaactagctgattcatctagactacattagagatgatcagatgatatatctaactagctgattcatctagactacattagagatgatcagattatatatctaactagctgattcatctagactacattagagatgatcagatgatataactaactagctgattcatctagactacattagagATGATCAGGTGACATAACTTACCCAACCCAGGAGGGGTTGTAGCAAAGAGGTCGTTTTTTATGACTCCCTTTCATTTGTTGTTCTAGCTTGCTTAGTCATtttttttgtggttgaatccACTTAGATCATTAGCCCTGTCAACGGTCTGTGCAACCTGTGTCCTGCAGTGGAGGTCCTCCttaggggaggaccatcctactcagtgaatttcagattATAATATGTTGAagtatcctttttagataaaactgtactacatacagtgccttcagaaagtattcataccccttgacttatttcacattttgtttctgttaaagcctgaattcaaaatggattacatttatttttctctcacccatctacacacaatat
>TU2282123
tcacatgtgctcagtgtgaacctgctttcatctgtgaaccAATTCGGATGATATTGTTGATTactgctgttttttttaaactctttTCTCTCTtgtaactagctgattcatctagactacattagagatgatcagattatatatctaactagctgattcatctagactacattagagATGATCAGGTGACataactaactagctgattcatctagactacattagaggtgatcagattatatatctaactagctgattcatctagactacattagaggtgatccgattatatatctaactagctgattcatctagactacattagagatgatccgatgatatatctaactagctgattcatctagactacattagagatgatcagattatatatctaactagctgattcatctagactacattagagatggtCAG

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2282122 False 753 lncRNA 0.36 2 7446801 7453901
TU2282123 True 435 lncRNA 0.34 4 7451217 7453901

Neighbor

gene id symbol gene type direction distance location
LOC110526832 LOC106587935 coding downstream 7198 7406157 ~ 7439603 (-)
LOC110527022 LOC106587927 coding downstream 267122 7175082 ~ 7179679 (-)
LOC110507001 LOC106587953 coding downstream 359850 7068612 ~ 7086951 (-)
LOC110506999 LOC105026498 coding downstream 385250 7048931 ~ 7061551 (-)
LOC118944479 NA coding downstream 398332 7047760 ~ 7048469 (-)
LOC118944524 LOC106562850 coding upstream 1320 7455221 ~ 7528244 (-)
LOC118944525 NA coding upstream 11219 7465120 ~ 7466620 (-)
LOC110526835 LOC105026486 coding upstream 104110 7558011 ~ 7564844 (-)
LOC110526838 LOC106587956 coding upstream 112715 7566616 ~ 7572156 (-)
LOC110526837 LOC106592039 coding upstream 125496 7579397 ~ 7596912 (-)
G1994084 NA non-coding downstream 41333 7405203 ~ 7405468 (-)
G1994082 NA non-coding downstream 46081 7400236 ~ 7400720 (-)
G1994077 NA non-coding downstream 56398 7390186 ~ 7390403 (-)
G1994065 NA non-coding downstream 80963 7365620 ~ 7365838 (-)
G1994059 NA non-coding downstream 92314 7353159 ~ 7354487 (-)
G1994111 NA non-coding upstream 13164 7467065 ~ 7467771 (-)
G1994112 NA non-coding upstream 21454 7475355 ~ 7477201 (-)
G1994113 NA non-coding upstream 22392 7476293 ~ 7476708 (-)
G1994115 NA non-coding upstream 30172 7484073 ~ 7488409 (-)
G1994116 NA non-coding upstream 30353 7484254 ~ 7485915 (-)
G1994075 NA other downstream 57233 7389245 ~ 7389568 (-)
LOC118936596 LOC106591161 other downstream 1002572 6391414 ~ 6444276 (-)
G1992485 NA other downstream 1458028 5986431 ~ 5988773 (-)
G1992375 NA other downstream 1738117 5708268 ~ 5708684 (-)
G1991846 NA other downstream 2187019 5257722 ~ 5259782 (-)
LOC118936603 LOC106587968 other upstream 197485 7647283 ~ 7665132 (-)
LOC110526845 LOC106592787 other upstream 295394 7744309 ~ 7751407 (-)
LOC118944558 LOC106595801 other upstream 349943 7802643 ~ 7809933 (-)
LOC110515105 LOC106593850 other upstream 417281 7863456 ~ 7873075 (-)
LOC118944463 LOC106562776 other upstream 646419 8096974 ~ 8105982 (-)

Expression


Co-expression Network