G1994394


Basic Information

Item Value
gene id G1994394
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 8252471 ~ 8253925 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2282593
TTTCTATACAGTACAGCAGAGGTTGACTAATGTACACTACTTACCAGTAAGGCTATGGTTTAGTCCAGTTGACTAGTGTACACTACTTACCAGTAAGGCTATGGTTTAGTCCAGTTGACTAGTGTACACTACTTACCAGTAAGGCTATGGTTTAATCCAGTTGACTAATGTACACTACTTACCAGTAAGGCTATGGTTTAGTCCAGTTGACTAGTGTACACTATTAAGGCTATGGTTTAGTCCAGTTGACTAGTGTACTCTACTAAGGCTATGGTTTAGTCCAGTTGACTAGTGTACACTACTTACCAGTAAGGCTATGGTTTAGTCCAGTTGACTAGTGTACAGTACTTACTATTAAGGCTATGGTTTAGTCCAGTTGACTAATGTACAGTACTTACCAGTAAGGCTATGGTTTAGTCCAGTTGACTAGTGTACACTACTAAGGCTATGGTTTAGTCCAGTTGACTAGTGTACACTACTTACTATTAAGGCTATGGTTTAGTCCAGTTGACTAATGTACACTACTTACTATTAAGGCTATGGTTTAGTCCAGTTGACTAATGTACACTACTAAGGCTATGGTTTAGTCCAGTTGACTAGTGTACACTACTTACTATTAAGGCTATGGTTTAGTCCAGTTGACTAATGTACACTACTCACTATTAAGGCTATGGTTTAGTCCAGTTGACTAATGTACACTACTTACCAGTAAGGCTATGATTTAGTCCAGTTGACTAATGTACAGTACTTACCATTAAGGCTATGGTTTAGTCCAGTTGACTAATGTACACTACTTACCAGTAAGGCTATGGTTTAGTCCAGTTGACTAATGTACACTACTTACTATTAAGGCTATGGTTTAGTCCAGTTGACTAGTGTACACTACTCACTATTAAGGCTATGGTTTAGTCCAGTTGACTAGTGTACACTACTTACTATTAAGGCTATGGTTTAGTCCAGTTGACTAATGTACACTACTTACCAGTAAGGCTATGGTTTAGTCCAGTTGACTAGTGTACACTACTTACTATTAAGGCTATGGTTGTGAACAGAACAGCAGACATGAGAATCCATATCCTAGAAAGAAAACACAGAAGAAAGACATAAATACATTGTATTGATCAGAAACACAGGAGAGGAATAAACACAGATATTGATCATCAGAAACACACTAGACAGAACTCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2282593 True 1186 lncRNA 0.38 3 8252471 8253925

Neighbor

gene id symbol gene type direction distance location
LOC118944505 LOC105029587 coding downstream 109108 8129328 ~ 8143363 (-)
LOC118944463 LOC106562776 coding downstream 148692 8096974 ~ 8105982 (-)
LOC110518910 LOC106587992 coding downstream 162901 8071029 ~ 8089570 (-)
LOC118944485 NA coding downstream 171521 8079456 ~ 8080950 (-)
LOC110519426 LOC106587985 coding downstream 287452 7943252 ~ 7965019 (-)
LOC110527031 LOC106587988 coding upstream 310375 8564300 ~ 8805872 (-)
LOC118944554 NA coding upstream 317804 8571729 ~ 8573559 (-)
LOC118944553 NA coding upstream 321290 8575215 ~ 8578501 (-)
LOC118944550 NA coding upstream 527734 8781659 ~ 8783606 (-)
LOC118936605 LOC106609696 coding upstream 572282 8826207 ~ 8870050 (-)
G1994359 NA non-coding downstream 62812 8188534 ~ 8189659 (-)
G1994355 NA non-coding downstream 85326 8166725 ~ 8167145 (-)
G1994341 NA non-coding downstream 103983 8145039 ~ 8148488 (-)
G1994334 NA non-coding downstream 132127 8119212 ~ 8120344 (-)
G1994322 NA non-coding downstream 189961 8062027 ~ 8062510 (-)
G1994419 NA non-coding upstream 56733 8310658 ~ 8311142 (-)
G1994422 NA non-coding upstream 61946 8315871 ~ 8319345 (-)
G1994432 NA non-coding upstream 92151 8346076 ~ 8348059 (-)
G1994409 NA non-coding upstream 94663 8348588 ~ 8349928 (-)
G1994433 NA non-coding upstream 98273 8352198 ~ 8352538 (-)
LOC110515105 LOC106593850 other downstream 379455 7863456 ~ 7873075 (-)
LOC118944558 LOC106595801 other downstream 446617 7802643 ~ 7809933 (-)
LOC110526845 LOC106592787 other downstream 501094 7744309 ~ 7751407 (-)
LOC118936603 LOC106587968 other downstream 587339 7647283 ~ 7665132 (-)
LOC110516734 LOC107593117 other upstream 839155 9090166 ~ 9108249 (-)
G1994674 NA other upstream 923113 9177038 ~ 9180705 (-)
G1994786 NA other upstream 1193668 9447593 ~ 9448494 (-)
G1994812 NA other upstream 1246791 9500716 ~ 9501653 (-)

Expression


Co-expression Network