G1994475


Basic Information

Item Value
gene id G1994475
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 8547155 ~ 8548140 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2282693
CTCTGGATCCGGTCCATAGCAACGCTCTCCTGGAAACGGCTAAGACCTggaagacagacggacagacggacagacagggaAAAGTTATCATGAGCAAGGCCACAAGAGAGAGAATATGAGTTTGAAAGAACTGCTGGTTTGCTAAGTGACCTATTTAGAAGTAAAGCTGTATAAGgaaaagagacagacagtgagtctGTTCCAACTCCGTTCTTAAAGAACTGCTGGTATGCTAAGCGACCTATTTAAAATGTCAGTCCTTGGTTCAAAAAAGACGTTGAGACACCCTGGTGTCACTCTGACTCCGCCTCCTCATCTGATCCACTAAACCCCTGGCACTCTGACTCCGCCTCCTCATCTGATCCACTAAACCCCTGGCACTCTGACTCCGCCTCCTCATCTGATCCACTAAACCCCTGGCACTCTGACTCCGCCTCCTCATCTGATCCACTAACAGGCTCTACAATATCTACCTAACCTGGCCCACACAGCACTACAACAGACTCTACAATATCTACCTAACCTGGCCCACACAGCACTACAACAGGCTCTACAATATCTACCTAACCTGGCCCACACAGCACTACAACAGGCTCTACAATATCTACCTAACCTGGCCCACACAGCACTACAACCTCTCTCTACAATATCTAACTAACCTGGCCCACACAGCACTACAACAGGCTCTACAATATCTACCTAACCTGGCCCACACAGCACTACAACAGGCTCTACAATATCTACCTAACCTGGCCCACACAGCACTACAACAGGCTCTACAATATCTAACTAACCTGGCCCACACAGCACTACAACAGGCTCTACAATATCTACCTAACCTGGCCCACACAGCACTACAACCTCTCTCTACAATATCTAACTAACCTGGCCCACACAGCACTACAACAGGCTCTACAATATCTACCTAACCTGGCCCACACA

Function

NR:

description
PREDICTED: uncharacterized protein LOC106591180 isoform X9

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2282693 True 942 lncRNA 0.48 2 8547155 8548140

Neighbor

gene id symbol gene type direction distance location
LOC118944505 LOC105029587 coding downstream 403792 8129328 ~ 8143363 (-)
LOC118944463 LOC106562776 coding downstream 443376 8096974 ~ 8105982 (-)
LOC110518910 LOC106587992 coding downstream 457585 8071029 ~ 8089570 (-)
LOC118944485 NA coding downstream 466205 8079456 ~ 8080950 (-)
LOC110519426 LOC106587985 coding downstream 582136 7943252 ~ 7965019 (-)
LOC110527031 LOC106587988 coding upstream 16160 8564300 ~ 8805872 (-)
LOC118944554 NA coding upstream 23589 8571729 ~ 8573559 (-)
LOC118944553 NA coding upstream 27075 8575215 ~ 8578501 (-)
LOC118944550 NA coding upstream 233519 8781659 ~ 8783606 (-)
LOC118936605 LOC106609696 coding upstream 278067 8826207 ~ 8870050 (-)
G1994457 NA non-coding downstream 59577 8487216 ~ 8487578 (-)
G1994453 NA non-coding downstream 71017 8475378 ~ 8476138 (-)
G1994304 NA non-coding downstream 83971 8461293 ~ 8463184 (-)
G1994433 NA non-coding downstream 194617 8352198 ~ 8352538 (-)
G1994409 NA non-coding downstream 197227 8348588 ~ 8349928 (-)
G1994494 NA non-coding upstream 35522 8583662 ~ 8680745 (-)
G1994496 NA non-coding upstream 44964 8593104 ~ 8593987 (-)
G1994499 NA non-coding upstream 78668 8626808 ~ 8627177 (-)
G1994500 NA non-coding upstream 80645 8628785 ~ 8629126 (-)
G1994505 NA non-coding upstream 96425 8644565 ~ 8645232 (-)
LOC110515105 LOC106593850 other downstream 674139 7863456 ~ 7873075 (-)
LOC118944558 LOC106595801 other downstream 741301 7802643 ~ 7809933 (-)
LOC110526845 LOC106592787 other downstream 795778 7744309 ~ 7751407 (-)
LOC118936603 LOC106587968 other downstream 882023 7647283 ~ 7665132 (-)
LOC110516734 LOC107593117 other upstream 544940 9090166 ~ 9108249 (-)
G1994674 NA other upstream 628898 9177038 ~ 9180705 (-)
G1994786 NA other upstream 899453 9447593 ~ 9448494 (-)
G1994812 NA other upstream 952576 9500716 ~ 9501653 (-)

Expression


Co-expression Network