G1994509


Basic Information

Item Value
gene id G1994509
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 8672717 ~ 8676597 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2282751
tctaacatataccctctcctctatactattctaacatataccctctcctctcctctattctaacatataccctctcctctattctattataacatataccctctcctctattctattctaacatataccctctcctctatactattctaacatataccctctcctctcctctattctattctaacatataccctctcctct
>TU2282749
tctaacatataccctctcctctatactattctaacatataccctctcctctcctctattctaacatataccctctcctctattctattctaacatataccctctcctctattatattctaacatataccctctcctctcctctattctattctaacatataccctctcctctatactattctaacatataccctctcctctcctctcctctcctctatactattctaacatataccctctcctctcctctcctctcctctattctattctaacatataccctctcctctcctctcctctcctctatactattctaacatctaccctctcctct
>TU2282750
tattctattctaacatataccctctcctctattctattctaacatataccctctcctctattctattctaacatataccctctcctctattctattctaacatataccctctcctctattctattctaacatataccctctcctctcctctattctattctaacatataccctctcctctatactattctaacatataccctctcctctcctctcctctcctctattctattctaacatataccctctcctctcctctcctctcctctatactattctaacatctaccctctcctct

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2282751 False 201 lncRNA 0.36 2 8672717 8676597
TU2282749 False 333 lncRNA 0.39 3 8672969 8676597
TU2282750 True 297 lncRNA 0.38 2 8672969 8675531

Neighbor

gene id symbol gene type direction distance location
LOC118944553 NA coding downstream 94216 8575215 ~ 8578501 (-)
LOC118944554 NA coding downstream 99158 8571729 ~ 8573559 (-)
LOC118944505 LOC105029587 coding downstream 529354 8129328 ~ 8143363 (-)
LOC118944463 LOC106562776 coding downstream 568938 8096974 ~ 8105982 (-)
LOC110518910 LOC106587992 coding downstream 583147 8071029 ~ 8089570 (-)
LOC118944550 NA coding upstream 105062 8781659 ~ 8783606 (-)
LOC118936605 LOC106609696 coding upstream 149610 8826207 ~ 8870050 (-)
LOC110499813 LOC106609698 coding upstream 231334 8907931 ~ 8959715 (-)
LOC110500985 LOC106595573 coding upstream 349181 9025778 ~ 9036386 (-)
LOC118944560 LOC106587999 coding upstream 366820 9043417 ~ 9073342 (-)
G1994507 NA non-coding downstream 16009 8655818 ~ 8656708 (-)
G1994505 NA non-coding downstream 27485 8644565 ~ 8645232 (-)
G1994500 NA non-coding downstream 43591 8628785 ~ 8629126 (-)
G1994499 NA non-coding downstream 45540 8626808 ~ 8627177 (-)
G1994496 NA non-coding downstream 78730 8593104 ~ 8593987 (-)
G1994511 NA non-coding upstream 4204 8680801 ~ 8681000 (-)
G1994512 NA non-coding upstream 4755 8681352 ~ 8681557 (-)
G1994513 NA non-coding upstream 9893 8686490 ~ 8688667 (-)
LOC110527031 LOC106587988 non-coding upstream 16807 8564300 ~ 8805872 (-)
G1994517 NA non-coding upstream 21986 8698583 ~ 8700083 (-)
LOC110515105 LOC106593850 other downstream 799701 7863456 ~ 7873075 (-)
LOC118944558 LOC106595801 other downstream 866863 7802643 ~ 7809933 (-)
LOC110526845 LOC106592787 other downstream 921340 7744309 ~ 7751407 (-)
LOC118936603 LOC106587968 other downstream 1007585 7647283 ~ 7665132 (-)
LOC110516734 LOC107593117 other upstream 416483 9090166 ~ 9108249 (-)
G1994674 NA other upstream 500441 9177038 ~ 9180705 (-)
G1994786 NA other upstream 770996 9447593 ~ 9448494 (-)
G1994812 NA other upstream 824119 9500716 ~ 9501653 (-)

Expression


Co-expression Network