XLOC_000390 (BX322647.1)


Basic Information

Item Value
gene id XLOC_000390
gene name BX322647.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 33215241 ~ 33216718 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00000663
GCACAGCATTGAGTTAAAGTGACCACAGAATAAAGTAAGCAAGTGTCAGAGGCAGAggagacacatcaaccagcaagtgtgtaactTATCAGgaaaatgactgactgaatggatGACTGTCTAGGTTGCAAGCAGGACATACTTGTTACAGTGAGCGCTGAATTGGAGAAGCCACTGTGTACCATGAATCTTTACAGCTGCTGAGGAGCTCTTGGAGTAAGACAGAGATCTGAGACTAAAGAACCGACAAGAACTGAACGGCTTGTGAGGGCAGTAATGTTGACCTGAGCAGGGGCCTTCTACAGGGGACCGCCTAAAGATActggcatcatcatcatcatcattgaagGTGTTAAAGTTCTTATAGACCTCATCTTTACCAGACTCAGGCAAACTCTGCTTTCACTCTGCCCAAAGCCCCAGCTGGACTGTTTTGGCCCAGGGTATccgatcaggccccggaagtgactgtGGAAACTTGACTGGCCCTGGCTCGCATTGGCACGCTAACTTAAGTCACGAGAGTGAAAACATGGCTCTTGACTACATTCCTAGAGCTTGTGTCCACCTGGGTTTGACCTATGCATTTTGACTGTGACAAAGAATGTTGTTTTTACAAGTGACTGTCTGGTTAACACTGAAAGATATTATAGGGTAGTATTCCCAAACTGTGGTGTCCTCTTTGCTTCAATGAATCTGCATTATTCTGGCAAATAATACCTTTCATGCATTAAATCA
>TCONS_00000664
ACAGCATTGAGTTAAAGTGACCACAGAATAAAGTAAGCAAGTGTCAGAGGCAGAggagacacatcaaccagcaagtgtgtaactTATCAGgaaaatgactgactgaatggatGACTGTCTAGGTTGCAAGCAGGACATACTTGTTACAGTTAAGTATTTCagctacaacatactgttaaatCACAATAACCATCTTGCCATTAATTGTAACTTCACAGTAAagtatagttaattctacaagagaATAAGGTGAAATCACAGAAATGGGCCTTACTATATACCTTGAAGTCACATAtggctgtaatttcactGTGAGCGCTGAATTGGAGAAGCCACTGTGTACCATGAATCTTTACAGCTGCTGAGGAGCTCTTGGAGTAAGACAGAGATCTGAG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000094318

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00000663 False 738 processed_transcript 0.45 4 33215241 33216718
TCONS_00000664 True 395 processed_transcript 0.39 3 33215243 33216083

Neighbor

gene id symbol gene type direction distance location
XLOC_000389 zgc:174320 coding upstream 421597 32791920 ~ 32793644 (+)
XLOC_000388 CU915272.1 coding upstream 509014 32706109 ~ 32706227 (+)
XLOC_000387 nlgn4xa coding upstream 521291 32521469 ~ 32693950 (+)
XLOC_000386 CU462859.1 coding upstream 701137 32513989 ~ 32514104 (+)
XLOC_000385 pudp coding upstream 829576 32341484 ~ 32385665 (+)
XLOC_000391 prkx coding downstream 1193 33217911 ~ 33283689 (+)
XLOC_000392 mxra5a coding downstream 105456 33322174 ~ 33334732 (+)
XLOC_000393 dhrsx coding downstream 166926 33383644 ~ 33487375 (+)
XLOC_000394 NA coding downstream 301084 33517802 ~ 33518823 (+)
XLOC_000395 chmp2bb coding downstream 341837 33558555 ~ 33569245 (+)
XLOC_000383 BX901898.1 non-coding upstream 1197126 32017437 ~ 32018115 (+)
XLOC_000381 NA non-coding upstream 1202863 32011880 ~ 32012378 (+)
XLOC_000380 NA non-coding upstream 1203447 32010262 ~ 32011794 (+)
XLOC_000400 CU915566.1 non-coding downstream 518300 33735018 ~ 33735134 (+)
XLOC_000401 CT573012.1 non-coding downstream 750439 33967157 ~ 33967273 (+)
XLOC_000403 dre-mir-734 non-coding downstream 906162 34122880 ~ 34122972 (+)
XLOC_000407 CR848003.1 non-coding downstream 1183522 34400240 ~ 34400354 (+)

Expression


Co-expression Network