Gene
RNA
| Item | Value |
|---|---|
| gene id | G1994517 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 8698583 ~ 8700083 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| ATP-binding cassette sub-family E member 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2282761 | False | 254 | lncRNA | 0.54 | 3 | 8698583 | 8700083 |
| TU2282762 | True | 200 | lncRNA | 0.54 | 2 | 8698583 | 8699003 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118944553 | NA | coding | downstream | 120082 | 8575215 ~ 8578501 (-) |
| LOC118944554 | NA | coding | downstream | 125024 | 8571729 ~ 8573559 (-) |
| LOC118944505 | LOC105029587 | coding | downstream | 555220 | 8129328 ~ 8143363 (-) |
| LOC118944463 | LOC106562776 | coding | downstream | 594804 | 8096974 ~ 8105982 (-) |
| LOC110518910 | LOC106587992 | coding | downstream | 609013 | 8071029 ~ 8089570 (-) |
| LOC118944550 | NA | coding | upstream | 81576 | 8781659 ~ 8783606 (-) |
| LOC118936605 | LOC106609696 | coding | upstream | 126124 | 8826207 ~ 8870050 (-) |
| LOC110499813 | LOC106609698 | coding | upstream | 207848 | 8907931 ~ 8959715 (-) |
| LOC110500985 | LOC106595573 | coding | upstream | 325695 | 9025778 ~ 9036386 (-) |
| LOC118944560 | LOC106587999 | coding | upstream | 343334 | 9043417 ~ 9073342 (-) |
| LOC110527031 | LOC106587988 | non-coding | downstream | 2048 | 8564300 ~ 8805872 (-) |
| G1994513 | NA | non-coding | downstream | 9916 | 8686490 ~ 8688667 (-) |
| G1994512 | NA | non-coding | downstream | 17026 | 8681352 ~ 8681557 (-) |
| G1994511 | NA | non-coding | downstream | 17583 | 8680801 ~ 8681000 (-) |
| G1994509 | NA | non-coding | downstream | 21986 | 8672717 ~ 8676597 (-) |
| G1994522 | NA | non-coding | upstream | 9725 | 8709808 ~ 8710294 (-) |
| G1994523 | NA | non-coding | upstream | 25977 | 8726060 ~ 8728462 (-) |
| G1994525 | NA | non-coding | upstream | 31717 | 8731800 ~ 8732460 (-) |
| G1994526 | NA | non-coding | upstream | 34808 | 8734891 ~ 8735391 (-) |
| G1994534 | NA | non-coding | upstream | 61473 | 8761556 ~ 8762170 (-) |
| LOC110515105 | LOC106593850 | other | downstream | 825567 | 7863456 ~ 7873075 (-) |
| LOC118944558 | LOC106595801 | other | downstream | 892729 | 7802643 ~ 7809933 (-) |
| LOC110526845 | LOC106592787 | other | downstream | 947206 | 7744309 ~ 7751407 (-) |
| LOC118936603 | LOC106587968 | other | downstream | 1033451 | 7647283 ~ 7665132 (-) |
| LOC110516734 | LOC107593117 | other | upstream | 392997 | 9090166 ~ 9108249 (-) |
| G1994674 | NA | other | upstream | 476955 | 9177038 ~ 9180705 (-) |
| G1994786 | NA | other | upstream | 747510 | 9447593 ~ 9448494 (-) |
| G1994812 | NA | other | upstream | 800633 | 9500716 ~ 9501653 (-) |
| G1996632 | NA | other | upstream | 2221933 | 10922016 ~ 10924533 (-) |
