G1994534



Basic Information


Item Value
gene id G1994534
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 8761556 ~ 8762170 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2282783
cacacacacatacgttttCTCAGATATTCTATACTGTGACCATCACAATCCCGTTTACAGAGCTGAAGtaatagttagttagtaacattgtcctggtctataatacctccagaactctagtagtagtaatagttagttagtaacattgtcctggtctataatacctccagaactctagtagtagtaatagttagtaacattgtcctggtctataatacctccagaactctagtagtagtaatagttagtaacattgtcctggtctataatacctccagaa
>TU2282784
TGTCCACaactctagtagtagtaatagttagtaacattgtcctggtctataatacctccagaactctagtagtagtaatagttagtaacattgtcctggtctataataactccagaactctagtagtagtaatagttagttagtaacattgtcctggtctatattacctccagaactctagtagtagtaatagttagttagtaacattgtcctggtctataatacctccagaactctagtagtagtaatagttagtaacattgtcctggtctataatacctccagaactctagtagtagtaatagttagtaacattgtcctggtctataatacctccagaa

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2282783 False 280 lncRNA 0.36 2 8761556 8762170
TU2282784 True 341 lncRNA 0.35 2 8761556 8762008

Neighbor


gene id symbol gene type direction distance location
LOC118944553 NA coding downstream 183055 8575215 ~ 8578501 (-)
LOC118944554 NA coding downstream 187997 8571729 ~ 8573559 (-)
LOC118944505 LOC105029587 coding downstream 618193 8129328 ~ 8143363 (-)
LOC118944463 LOC106562776 coding downstream 657777 8096974 ~ 8105982 (-)
LOC110518910 LOC106587992 coding downstream 671986 8071029 ~ 8089570 (-)
LOC118944550 NA coding upstream 19489 8781659 ~ 8783606 (-)
LOC118936605 LOC106609696 coding upstream 64037 8826207 ~ 8870050 (-)
LOC110499813 LOC106609698 coding upstream 145761 8907931 ~ 8959715 (-)
LOC110500985 LOC106595573 coding upstream 263608 9025778 ~ 9036386 (-)
LOC118944560 LOC106587999 coding upstream 281247 9043417 ~ 9073342 (-)
G1994526 NA non-coding downstream 26165 8734891 ~ 8735391 (-)
G1994525 NA non-coding downstream 29096 8731800 ~ 8732460 (-)
G1994523 NA non-coding downstream 33094 8726060 ~ 8728462 (-)
G1994522 NA non-coding downstream 51262 8709808 ~ 8710294 (-)
G1994518 NA non-coding downstream 61178 8699120 ~ 8700378 (-)
G1994536 NA non-coding upstream 3939 8766109 ~ 8767086 (-)
G1994541 NA non-coding upstream 29007 8791177 ~ 8791686 (-)
G1994562 NA non-coding upstream 105299 8867469 ~ 8868005 (-)
G1994563 NA non-coding upstream 108485 8870655 ~ 8870930 (-)
LOC110527031 LOC106587988 other downstream 12812 8564300 ~ 8805872 (-)
LOC110515105 LOC106593850 other downstream 888540 7863456 ~ 7873075 (-)
LOC118944558 LOC106595801 other downstream 955702 7802643 ~ 7809933 (-)
LOC110526845 LOC106592787 other downstream 1010179 7744309 ~ 7751407 (-)
LOC110516734 LOC107593117 other upstream 330910 9090166 ~ 9108249 (-)
G1994674 NA other upstream 414868 9177038 ~ 9180705 (-)
G1994786 NA other upstream 685423 9447593 ~ 9448494 (-)
G1994812 NA other upstream 738546 9500716 ~ 9501653 (-)
G1996632 NA other upstream 2159846 10922016 ~ 10924533 (-)

Expression



Co-expression Network