G1994536


Basic Information

Item Value
gene id G1994536
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 8766109 ~ 8767086 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2282786
TCTCATTGTGTGTTTTGGTTGTCAGGCTGGGATTGAGATGGATAGTCAAGCTGTTGTCTCCTCTCATTGTGTGTTTTGGTTGTCAGGCTGGGATTGAGATCGATCGTCAAGCTGTTGTCTCTTCTCATTGTGTGTTTTGGTTGTCAGGCTGGGATTGAGATGGATAGTCAAGCTGTTGTCTCCTCTCATTGTGTGTTTTGGTTGTCAGGCTGGGATTGAGATGGATAGTCAAGCTGTTGTCTCTTCTCATTGTGTGTTTTGGTTGTCAGGCTGGGATTGAGATGGATAGTCAAGCTGTTGTCTCTTCTCATTGTGTGTTTTGGTTGTCAGGCTGGGATTGAGATGGATAGTCAAGCTGTTGTCTCTTCTCATTGTGTGTTTTGGTTGTCAGGCTGGGATTGAGATCGATAGTCAAGCTGTTGTCTCTTCTCATTGTGTGTTTTGGTTGTCAGGCTGGGATTGAGATGGATAGTCAAGCTGTTATCTCCTCTCATTGTGTGGTGCTGTTGTTGTTTATGCCAGACTGTGTTTGAGACACTGTCTGTTGGGGGCCTGTGGTACGAAAATCTGAGTTTGTGGGACATCTCTGTGTAATCAGGCTGTGTTTGAGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2282786 True 612 lncRNA 0.45 2 8766109 8767086

Neighbor

gene id symbol gene type direction distance location
LOC118944553 NA coding downstream 187608 8575215 ~ 8578501 (-)
LOC118944554 NA coding downstream 192550 8571729 ~ 8573559 (-)
LOC118944505 LOC105029587 coding downstream 622746 8129328 ~ 8143363 (-)
LOC118944463 LOC106562776 coding downstream 662330 8096974 ~ 8105982 (-)
LOC110518910 LOC106587992 coding downstream 676539 8071029 ~ 8089570 (-)
LOC118944550 NA coding upstream 14573 8781659 ~ 8783606 (-)
LOC118936605 LOC106609696 coding upstream 59121 8826207 ~ 8870050 (-)
LOC110499813 LOC106609698 coding upstream 140845 8907931 ~ 8959715 (-)
LOC110500985 LOC106595573 coding upstream 258692 9025778 ~ 9036386 (-)
LOC118944560 LOC106587999 coding upstream 276331 9043417 ~ 9073342 (-)
G1994534 NA non-coding downstream 3939 8761556 ~ 8762170 (-)
G1994526 NA non-coding downstream 30718 8734891 ~ 8735391 (-)
G1994525 NA non-coding downstream 33649 8731800 ~ 8732460 (-)
G1994523 NA non-coding downstream 37647 8726060 ~ 8728462 (-)
G1994522 NA non-coding downstream 55815 8709808 ~ 8710294 (-)
G1994541 NA non-coding upstream 24091 8791177 ~ 8791686 (-)
G1994562 NA non-coding upstream 100383 8867469 ~ 8868005 (-)
G1994563 NA non-coding upstream 103569 8870655 ~ 8870930 (-)
G1994574 NA non-coding upstream 130924 8898010 ~ 8898445 (-)
LOC110527031 LOC106587988 other downstream 17365 8564300 ~ 8805872 (-)
LOC110515105 LOC106593850 other downstream 893093 7863456 ~ 7873075 (-)
LOC118944558 LOC106595801 other downstream 960255 7802643 ~ 7809933 (-)
LOC110526845 LOC106592787 other downstream 1014732 7744309 ~ 7751407 (-)
LOC110516734 LOC107593117 other upstream 325994 9090166 ~ 9108249 (-)
G1994674 NA other upstream 409952 9177038 ~ 9180705 (-)
G1994786 NA other upstream 680507 9447593 ~ 9448494 (-)
G1994812 NA other upstream 733630 9500716 ~ 9501653 (-)
G1996632 NA other upstream 2154930 10922016 ~ 10924533 (-)

Expression


Co-expression Network