Gene
RNA
| Item | Value |
|---|---|
| gene id | G1994670 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 9163344 ~ 9163550 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Retrotransposon-derived protein PEG10 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2282976 | True | 207 | lncRNA | 0.50 | 1 | 9163344 | 9163550 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110516734 | LOC107593117 | coding | downstream | 55095 | 9090166 ~ 9108249 (-) |
| LOC118944560 | LOC106587999 | coding | downstream | 90002 | 9043417 ~ 9073342 (-) |
| LOC110500985 | LOC106595573 | coding | downstream | 126958 | 9025778 ~ 9036386 (-) |
| LOC110499813 | LOC106609698 | coding | downstream | 203629 | 8907931 ~ 8959715 (-) |
| LOC118936605 | LOC106609696 | coding | downstream | 293294 | 8826207 ~ 8870050 (-) |
| otud7a | LOC106591491 | coding | upstream | 95426 | 9258976 ~ 9384991 (-) |
| gtf2a2 | gtf2a2 | coding | upstream | 228411 | 9391961 ~ 9394414 (-) |
| LOC110506256 | LOC106561895 | coding | upstream | 957500 | 10121050 ~ 10126999 (-) |
| fhl5 | LOC106561894 | coding | upstream | 1003559 | 10167109 ~ 10184060 (-) |
| fut9a | LOC106561893 | coding | upstream | 1049984 | 10213534 ~ 10225704 (-) |
| G1994666 | NA | non-coding | downstream | 6502 | 9156581 ~ 9156842 (-) |
| G1994665 | NA | non-coding | downstream | 6999 | 9155944 ~ 9156345 (-) |
| G1994664 | NA | non-coding | downstream | 8632 | 9154507 ~ 9154712 (-) |
| G1994661 | NA | non-coding | downstream | 14851 | 9148234 ~ 9148493 (-) |
| G1994660 | NA | non-coding | downstream | 15193 | 9147919 ~ 9148151 (-) |
| G1994672 | NA | non-coding | upstream | 8575 | 9172125 ~ 9172995 (-) |
| G1994675 | NA | non-coding | upstream | 18936 | 9182486 ~ 9183979 (-) |
| G1994677 | NA | non-coding | upstream | 26666 | 9190216 ~ 9191291 (-) |
| G1994688 | NA | non-coding | upstream | 51153 | 9214703 ~ 9215605 (-) |
| G1994690 | NA | non-coding | upstream | 53421 | 9216971 ~ 9218791 (-) |
| LOC110527031 | LOC106587988 | other | downstream | 414600 | 8564300 ~ 8805872 (-) |
| LOC118944463 | LOC106562776 | other | downstream | 1057362 | 8096974 ~ 8105982 (-) |
| LOC110515105 | LOC106593850 | other | downstream | 1290328 | 7863456 ~ 7873075 (-) |
| LOC118944558 | LOC106595801 | other | downstream | 1357490 | 7802643 ~ 7809933 (-) |
| G1994674 | NA | other | upstream | 13488 | 9177038 ~ 9180705 (-) |
| G1994786 | NA | other | upstream | 284043 | 9447593 ~ 9448494 (-) |
| G1994812 | NA | other | upstream | 337166 | 9500716 ~ 9501653 (-) |
| G1996632 | NA | other | upstream | 1758466 | 10922016 ~ 10924533 (-) |
| G1996949 | NA | other | upstream | 2254549 | 11418099 ~ 11418335 (-) |
