G1994672


Basic Information

Item Value
gene id G1994672
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 9172125 ~ 9172995 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2282979
ACTATACAGAGAGACAGTGCTGTGGACTGTTGTATCTGCGATAAAGagccctcccccctctctctctctctctctctctctctcttatcttctAGAGAAAAAAAACGTCTCAGTGCAAGAGGAATAAGAgatactatactgtctctttctcccccacacgctctctctctctctctctccctctctctatctctctctctctctctctctctctctctccctctccctctctctccctctttctctctctccctctctctctcccactctctctctctttctcccgctctctcccgctctctagtctctctcgctctccctctctccctctccctccctctctctcctgctctctatagtctttctctctctccctctccctccctctctctcctgctctctatagt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2282979 True 407 lncRNA 0.51 2 9172125 9172995

Neighbor

gene id symbol gene type direction distance location
LOC110516734 LOC107593117 coding downstream 63876 9090166 ~ 9108249 (-)
LOC118944560 LOC106587999 coding downstream 98783 9043417 ~ 9073342 (-)
LOC110500985 LOC106595573 coding downstream 135739 9025778 ~ 9036386 (-)
LOC110499813 LOC106609698 coding downstream 212410 8907931 ~ 8959715 (-)
LOC118936605 LOC106609696 coding downstream 302075 8826207 ~ 8870050 (-)
otud7a LOC106591491 coding upstream 85981 9258976 ~ 9384991 (-)
gtf2a2 gtf2a2 coding upstream 218966 9391961 ~ 9394414 (-)
LOC110506256 LOC106561895 coding upstream 948055 10121050 ~ 10126999 (-)
fhl5 LOC106561894 coding upstream 994114 10167109 ~ 10184060 (-)
fut9a LOC106561893 coding upstream 1040539 10213534 ~ 10225704 (-)
G1994670 NA non-coding downstream 8575 9163344 ~ 9163550 (-)
G1994666 NA non-coding downstream 15283 9156581 ~ 9156842 (-)
G1994665 NA non-coding downstream 15780 9155944 ~ 9156345 (-)
G1994664 NA non-coding downstream 17413 9154507 ~ 9154712 (-)
G1994661 NA non-coding downstream 23632 9148234 ~ 9148493 (-)
G1994675 NA non-coding upstream 9491 9182486 ~ 9183979 (-)
G1994677 NA non-coding upstream 17221 9190216 ~ 9191291 (-)
G1994688 NA non-coding upstream 41708 9214703 ~ 9215605 (-)
G1994690 NA non-coding upstream 43976 9216971 ~ 9218791 (-)
G1994697 NA non-coding upstream 58186 9231181 ~ 9232461 (-)
LOC110527031 LOC106587988 other downstream 423381 8564300 ~ 8805872 (-)
LOC118944463 LOC106562776 other downstream 1066143 8096974 ~ 8105982 (-)
LOC110515105 LOC106593850 other downstream 1299109 7863456 ~ 7873075 (-)
LOC118944558 LOC106595801 other downstream 1366271 7802643 ~ 7809933 (-)
G1994674 NA other upstream 4043 9177038 ~ 9180705 (-)
G1994786 NA other upstream 274598 9447593 ~ 9448494 (-)
G1994812 NA other upstream 327721 9500716 ~ 9501653 (-)
G1996632 NA other upstream 1749021 10922016 ~ 10924533 (-)
G1996949 NA other upstream 2245104 11418099 ~ 11418335 (-)

Expression


Co-expression Network