G1994697


Basic Information

Item Value
gene id G1994697
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 9231181 ~ 9232461 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2283020
gttcatttttattgtttatttcacttttgtttattatctacttcacttgctttgacaatgttaactaacatatgtttccaatgccaataaagcccttaaatttaattgaattgaattcagagagagagagagatacagagagagagagatgggtcaaCCATactgtatggagggagaagagttACATTCCTATGGTACGTCCCCCTGGACAAGTGAACTAGCTAactaaacaataataataaacctTCCCATAATAAACCCCATAATAAACCTTCCCATAATAAACCTTCCCATAATAAACCTTCCCATAATAAACCTTCCCATAATAAACCTTCCCATAATAAACgttcccataataaaccccataataaaccccataataaaccttcccataataaaccttcccataataaaccttcccataataaaccccataataaaccttcccataataaaccttcccataataaaccccatattcaaccttcccataataaaccccacaataaaccttcccataataaaccttcccataataaaccttcccataataaaccttcccataataaaccttcccataataaaccccataataaaccttcccataataaaccttcccataataaaccttcccataataaaccttcccataataaaccccataataaaccttcccataataaaccttcccataataaaccccataatAAACCTTCCCATAATAAACCTTTCCATAGCAGTTTCAAAGCCGTCTCCAGTTGAGGTTTTCAACGGCAGCCTTATGTGCAGTTCGATGGAAATGGCTCCTGGAAAGCACATGATAATGATCTCTGAACCAGCACTCCTGGTTCCTGTTCT
>TU2283019
gttcatttttattgtttatttcacttttgtttattatctacttcacttgctttgacaatgttaactaacatatgtttccaatgccaataaagcccttaaatttaattgaattgaattcagagagagagagagatacagagagagagagatgggtcaaCCATactgtatggagggagaagagttACATTCCTATGGTACGTCCCCCTGGACAAGTGAACTAGCTAactaaacaataataataaacctTCCCATAATAAACCccataataaaccttcccataataaaccttcccataataaaccttcccataataaaccttcccataataaaccttcccataataaaccccataataaaccccataataaaccttcccataataaaccccataatAAACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2283020 False 858 lncRNA 0.36 3 9231181 9232461
TU2283019 True 398 lncRNA 0.34 2 9231632 9232461

Neighbor

gene id symbol gene type direction distance location
LOC110516734 LOC107593117 coding downstream 122932 9090166 ~ 9108249 (-)
LOC118944560 LOC106587999 coding downstream 157839 9043417 ~ 9073342 (-)
LOC110500985 LOC106595573 coding downstream 194795 9025778 ~ 9036386 (-)
LOC110499813 LOC106609698 coding downstream 271466 8907931 ~ 8959715 (-)
LOC118936605 LOC106609696 coding downstream 361131 8826207 ~ 8870050 (-)
otud7a LOC106591491 coding upstream 26515 9258976 ~ 9384991 (-)
gtf2a2 gtf2a2 coding upstream 159500 9391961 ~ 9394414 (-)
LOC110506256 LOC106561895 coding upstream 888589 10121050 ~ 10126999 (-)
fhl5 LOC106561894 coding upstream 934648 10167109 ~ 10184060 (-)
fut9a LOC106561893 coding upstream 981073 10213534 ~ 10225704 (-)
G1994690 NA non-coding downstream 12390 9216971 ~ 9218791 (-)
G1994688 NA non-coding downstream 15576 9214703 ~ 9215605 (-)
G1994677 NA non-coding downstream 39890 9190216 ~ 9191291 (-)
G1994675 NA non-coding downstream 47202 9182486 ~ 9183979 (-)
G1994672 NA non-coding downstream 58186 9172125 ~ 9172995 (-)
G1994679 NA non-coding upstream 486 9232947 ~ 9234808 (-)
G1994678 NA non-coding upstream 2510 9234971 ~ 9241675 (-)
G1994715 NA non-coding upstream 52273 9284734 ~ 9285289 (-)
G1994721 NA non-coding upstream 57434 9289895 ~ 9290304 (-)
G1994674 NA other downstream 50476 9177038 ~ 9180705 (-)
LOC110527031 LOC106587988 other downstream 482437 8564300 ~ 8805872 (-)
LOC118944463 LOC106562776 other downstream 1125199 8096974 ~ 8105982 (-)
LOC110515105 LOC106593850 other downstream 1358165 7863456 ~ 7873075 (-)
G1994786 NA other upstream 215132 9447593 ~ 9448494 (-)
G1994812 NA other upstream 268255 9500716 ~ 9501653 (-)
G1996632 NA other upstream 1689555 10922016 ~ 10924533 (-)
G1996949 NA other upstream 2185638 11418099 ~ 11418335 (-)
G1999856 NA other upstream 4104874 13337335 ~ 13338151 (-)

Expression


Co-expression Network