G1994779


Basic Information

Item Value
gene id G1994779
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 9431762 ~ 9432054 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2283134
TGGGAAAGGACTTCCAGGAGACAGGATCAATGTAACGTTACGATGACAGGTCTTGGGAAAGGACTTCCAGGAGACAGGATCAATGTAACGTTACGATGACAGGTCTTGGGAAAGGACTTCCAGGAGACAGGATCAATGTAACATTACGATGAAAGGTCTTGGGAAAGGACTTCCAGGAGACAGGATCAATGTAACGTTACGATGACAGGTCTTAGGAAAGGACTTCCAGGAGACAGGATCAATGTAACGTTACGATAACAGGTCTTGGGAAAGGACTTCCAGGAGACAGGATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2283134 True 293 lncRNA 0.46 1 9431762 9432054

Neighbor

gene id symbol gene type direction distance location
klf13 LOC105021104 coding upstream 197759 9173028 ~ 9234003 (+)
LOC118936595 LOC106609700 coding upstream 416275 8982115 ~ 9015487 (+)
LOC118944396 idh3a coding upstream 450139 8964942 ~ 8981623 (+)
LOC118944518 LOC106609706 coding upstream 538602 8880465 ~ 8893160 (+)
LOC118944519 NA coding upstream 596931 8832283 ~ 8834831 (+)
LOC110526863 LOC106562818 coding downstream 108232 9540286 ~ 9543273 (+)
si:ch211-266g18.10 LOC106561896 coding downstream 275400 9707454 ~ 9812098 (+)
LOC110506241 LOC106561900 coding downstream 413873 9845927 ~ 9918295 (+)
LOC110506240 NA coding downstream 512755 9944809 ~ 9965961 (+)
gnmt gnmt coding downstream 836897 10268951 ~ 10282107 (+)
G1994773 NA non-coding upstream 9998 9421459 ~ 9421764 (+)
G1994759 gtf2a2 non-coding upstream 37324 9392064 ~ 9394438 (+)
G1994760 NA non-coding upstream 40081 9391429 ~ 9391681 (+)
G1994756 NA non-coding upstream 41346 9390083 ~ 9390416 (+)
G1994753 NA non-coding upstream 43951 9387481 ~ 9387811 (+)
G1994797 NA non-coding downstream 38907 9470961 ~ 9471435 (+)
G1994805 NA non-coding downstream 52746 9484800 ~ 9485025 (+)
G1994810 NA non-coding downstream 67739 9499793 ~ 9500018 (+)
G1994815 NA non-coding downstream 73721 9505775 ~ 9508574 (+)
G1994816 NA non-coding downstream 73781 9505835 ~ 9506448 (+)
G1994757 LOC106613263 other upstream 40829 9390568 ~ 9390933 (+)
G1993783 NA other upstream 733639 8697174 ~ 8698123 (+)
G1993771 herc1 other upstream 763495 8666601 ~ 8668267 (+)
LOC110512379 LOC106587994 other upstream 880395 8537913 ~ 8553492 (+)
G1993593 LOC106587964 other upstream 1283263 8143752 ~ 8148919 (+)
G1994851 NA other downstream 132989 9560723 ~ 9566154 (+)
G1998628 NA other downstream 3789983 13222037 ~ 13222681 (+)
G2002614 NA other downstream 6257714 15689768 ~ 15696280 (+)
LOC110506284 LOC106561914 other downstream 6363078 15734525 ~ 15800073 (+)
G2002823 NA other downstream 6639933 16071987 ~ 16074044 (+)

Expression


Co-expression Network